Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 731 a.a., Cyclolysin secretion/processing ATP-binding protein CyaB from Pseudomonas putida KT2440

 Score =  546 bits (1408), Expect = e-159
 Identities = 298/683 (43%), Positives = 431/683 (63%), Gaps = 7/683 (1%)

Query: 43  TSSQLKHALGVSYANLTDMEMREAADYLGLKSQITKLSIQAFNTLPLPAL-IEYQGGWKV 101
           ++ QL+H    +    +   +  A   LGLK++   +        PLPA+ ++ +G + +
Sbjct: 48  SAEQLQHDHAAAGERFSTGPLLRAFQQLGLKAKHRSVDPARLQQTPLPAIAVDTRGEYFI 107

Query: 102 MIQTDDNGWTAYDPATDSLHTLSFTSAESTAHYKVMLI---ADESLSVKEVKFGLSWFAP 158
           + + +       DP + +   L  T AE    +   LI   +D  L +   +F  +WF P
Sbjct: 108 IARVEGEQVLVQDPHSRAPQAL--TLAELLVRWSGELILVRSDAQLPLGLSRFDFTWFIP 165

Query: 159 SILRQKSQLRDVFLYAIALQIFALVSPMLFENVIDKVLVGRSLSSLHVLALAMLALAIAE 218
           ++++ +    +V + ++ +QI AL++P+ F+ V+DKVLV R L++L V+AL +L + + E
Sbjct: 166 ALVKYRRLFGEVLVVSLVIQILALLTPLFFQVVMDKVLVHRGLTTLDVIALGLLVVVLFE 225

Query: 219 PAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVREMAQIRQFL 278
              S LR  V  H AS+++ EL  +L+RHL+ LP  YF  R+ G  +ARVRE+  IR FL
Sbjct: 226 TLLSGLRTYVAAHTASRIDVELGAKLFRHLIDLPTAYFHARRVGDSVARVRELENIRSFL 285

Query: 279 TGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVLWLIAGPLIRKKVESEYES 338
           T +++ L+LD++F  VF+AVMF Y+  LT +V+GSL  YF++ L+  PL+R  ++  ++ 
Sbjct: 286 TNNSITLVLDVLFSVVFIAVMFLYSGWLTLVVVGSLPFYFLVSLVVTPLLRALIDQSFQR 345

Query: 339 DANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNRSFDAQKSGLIAGQAIALVQ 398
            A    FL EAV GI+T+K+ A E +   +W   L+  ++ SF  Q    +A +++ L+ 
Sbjct: 346 GAENQAFLVEAVNGIDTLKSMAVEPQVTRRWNDQLAAYVSASFKTQNLSSLANESVGLIG 405

Query: 399 KLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVG 458
           KL     LW G   V++G +T G+L+AFNMLAG V+QP++RLAQ+W  FQ T ++++R+G
Sbjct: 406 KLVTVATLWLGARLVIEGALTVGELIAFNMLAGRVSQPIIRLAQLWTSFQQTGVSIQRLG 465

Query: 459 DILDEPRENSKQGLASVPELDGGIEFSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPS 518
           DIL+   E ++     +P L G IE   + FRY  D  EV+ ++SLKI  G+ IGV G S
Sbjct: 466 DILNTRTEVNQGKGTVLPTLVGQIELDRVCFRYRPDGGEVVRDVSLKIAAGEVIGVVGRS 525

Query: 519 GSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIR 578
           GSGKSTLTRL+QRLY P+ G+VL DG DLA+AD  SLRR + VVLQ+++LF  +V +NI 
Sbjct: 526 GSGKSTLTRLIQRLYSPERGRVLPDGADLAVADVASLRRQIGVVLQDNVLFRRTVRENIA 585

Query: 579 LCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQRQRIALARALLVNP 638
           L  P A  EE+  AA LAGA  FI  LP G+   +GE GA+LSGGQRQRIA+ARAL  NP
Sbjct: 586 LGNPAAPLEEVIAAATLAGAHEFILELPDGYETLIGEHGASLSGGQRQRIAIARALFGNP 645

Query: 639 RILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRLNTIRHADNIFVLDKGQVAES 698
           RIL+ DEATSALDY SE  I  NM  IC  RTVI IAHRL+ +RHAD I V+++GQ+ E 
Sbjct: 646 RILIFDEATSALDYESERIIQQNMARICAQRTVIIIAHRLSAVRHADRIVVMERGQIIEQ 705

Query: 699 GTHEELLA-QQGLYAKLWTQQVG 720
           GTH+ELL   QG YA L   Q+G
Sbjct: 706 GTHDELLGYPQGTYAYLHQLQLG 728