Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 711 a.a., peptidase domain-containing ABC transporter from Pseudomonas sp. SVBP6

 Score =  295 bits (756), Expect = 4e-84
 Identities = 213/683 (31%), Positives = 335/683 (49%), Gaps = 32/683 (4%)

Query: 47  LKHALGVSYANLTDMEMREAADYLGLKSQITKLSIQAFNTLPLPALIEYQ-GGWKVMIQT 105
           L+  L  S    T  ++   A  LGL S+  +L +QA   L LP ++ +    + V+ + 
Sbjct: 31  LRQKLSPSMKGATLKQLMAMAAQLGLASRPLRLELQALGQLRLPCVLHWNFNHFVVLKEV 90

Query: 106 DDNGWTAYDPATDSLHTLSFTSAESTAHYKVMLI-----------ADESLSVKEVKFGLS 154
              G   +DP    +  LSF    STA   V L            A+  L ++++   + 
Sbjct: 91  GPRGVILHDPGR-GVCKLSFDEV-STAFTGVALELWPQGDFQPGPANPPLRLRQLLGRVQ 148

Query: 155 WFAPSILRQKSQLRDVFLYAIALQIFALVSPMLFENVIDKVLVGRSLSSLHVLALAMLAL 214
            FA         L  V L A AL++  ++SP   + VIDKVLV   L  L VLA+    L
Sbjct: 149 GFA-------GVLSHVLLLAAALELCIVLSPFFLQTVIDKVLVSADLDLLAVLAIGFGLL 201

Query: 215 AIAEPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVREMAQI 274
            + +   +  R+    +L + ++++    ++ HLV LP+ +F++R  G I++R   +  I
Sbjct: 202 LLMQQTLALARSWALMYLGTLLSSQWQINVFSHLVRLPVAFFERRHLGDIVSRFGSLKSI 261

Query: 275 RQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVL-WLIAGPLIRKKVE 333
           +  LT S +  LLD +   V L +MF Y+  L  + + ++VIY +  W   GPL R+  E
Sbjct: 262 QHTLTTSFVEALLDGLMTLVTLGLMFAYSPLLALIALLAMVIYALARWAWFGPL-RRASE 320

Query: 334 SEYESDANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNRSFDAQKSGLIAGQA 393
            +    A   ++  E++ G+ TIK    + +    W  +L +++N     QK  L     
Sbjct: 321 EQLVHAARQQSYFLESMRGVRTIKLFGHQEQRASTWGSLLVEEINAGLRPQKLELAYRAF 380

Query: 394 IALVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLIA 453
             L+  L   L++W G   VL+G+ + G L+AFN    H    V  L     D     + 
Sbjct: 381 NGLLFGLVTLLVIWLGARLVLEGQFSAGMLIAFNAYKEHFNSRVAGLIDKLVDVLMLRLH 440

Query: 454 LRRVGDIL---DEPRENSKQGLASVPELDGGIEFSNIRFRYHQDAPEVLANLSLKIKPGQ 510
             R+ DIL    E R+    G +   E    +E   ++FRY +  P VL  +S++I+ G 
Sbjct: 441 GERLADILLQVPEHRQFPAAGDSDADECVPSLEVRQLKFRYGEHEPYVLDEVSVRIEAGD 500

Query: 511 FIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQESILFS 570
            + + GPSG GK+TL  ++  +  P  G VL+DG+ +   +   LRR  + VLQ+ +LF+
Sbjct: 501 SLAIVGPSGGGKTTLLNVMLGILTPSSGSVLLDGVAIDSHNLDRLRRISATVLQDDVLFA 560

Query: 571 GSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQRQRIAL 630
           GS+ADNI     +A+   +   A++A     I  +P  +N  VG+ G  LSGGQ+QRI L
Sbjct: 561 GSIADNISFFSAEANPRWVEQCARMAAVHDDIAQMPMAYNTLVGDMGTVLSGGQKQRILL 620

Query: 631 ARALLVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRLNTIRHADNIFVL 690
           ARAL   P++L LDEATS LD   EA++   +  +    T I +AHR +TIR A  +  L
Sbjct: 621 ARALYRRPKLLFLDEATSHLDIAREAAVNQALQAL--NITRIIVAHRPDTIRSARRVLAL 678

Query: 691 DKGQVAESG----THEELLAQQG 709
           D G+V   G    T E   A+ G
Sbjct: 679 DNGRVVYDGPLIETDEHAPAESG 701