Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., lipid A export permease/ATP-binding protein MsbA from Magnetospirillum magneticum AMB-1

 Score =  280 bits (717), Expect = 1e-79
 Identities = 183/538 (34%), Positives = 282/538 (52%), Gaps = 3/538 (0%)

Query: 186 MLFENVIDKVLVGRSLSSLHVLALAMLALAIAEPAYSYLRNTVFGHLASQVNAELSGRLY 245
           +L + V++K+   +    L  LALA+L     +   +Y        +  +V A++  RL+
Sbjct: 50  LLMDPVVNKIFTEKRPEFLLPLALAVLGTFAVKSVCNYGEAVFLSKVGLRVIADMQSRLF 109

Query: 246 RHLVGLPLTYFKQRQTGQIIARV-REMAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYAS 304
            HL+ L + +F    TG+I++R+  +++Q+R  ++ +      D   V   +  MF+   
Sbjct: 110 AHLMRLDVAFFHANSTGRILSRLTNDISQMRFAVSDALTGAGKDASSVIFLIGAMFYQDW 169

Query: 305 TLTWLVIGSLVIYFVLWLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKTTATEHR 364
            L+        I  +     G  +RK   +  E     TT+L +AV GI  +K    E  
Sbjct: 170 RLSAWTFFIFPIAILPIRKLGRRMRKVTANTQEHMGQLTTYLEQAVQGIRVVKAYGMEEY 229

Query: 365 FLEQWQRILSQQLNRSFDAQKSGLIAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQLV 424
              +   ++    +  + A +    +   + L+  +   +++ +G + V+ GE TPG   
Sbjct: 230 EKRKVGALVEMLQDLIYKAARVRSASSPIMELLGGIAITVVILYGGTRVVNGETTPGAFF 289

Query: 425 AFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILD-EPRENSKQGLASVPELDGGIE 483
           +F        +P+  LA +  + Q  L A  R   +LD +P    K G A +  L+G + 
Sbjct: 290 SFITALMLAYRPIKSLAAMNTNLQEGLAAASRTFSVLDTQPTIFEKDGAADLVVLEGNVS 349

Query: 484 FSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVD 543
           F  + F Y   +  VL  + L +  G+ + + GPSG+GKST+  LL R Y    G VLVD
Sbjct: 350 FEGVFFTY-DGSKAVLDGIDLAVPGGKTVALVGPSGAGKSTVLNLLPRFYDVTDGHVLVD 408

Query: 544 GMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIE 603
           G D+      SLR  +++V QE  LF  S+  NI   +  A+DEEI  AA+ A A  FI 
Sbjct: 409 GQDVRNVSLSSLRSKIALVSQEITLFDDSIRANIAYGRFGATDEEIEAAARSAAAHDFIV 468

Query: 604 GLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMSNMD 663
            LP G++  VGE+G  LSGGQRQR+A+ARA+L N  ILLLDEATSALD  SE  + + ++
Sbjct: 469 SLPEGYDTVVGERGLNLSGGQRQRLAIARAMLKNAPILLLDEATSALDTESERQVQTALE 528

Query: 664 EICRGRTVISIAHRLNTIRHADNIFVLDKGQVAESGTHEELLAQQGLYAKLWTQQVGE 721
            + RGRT I IAHRL+T+ +AD I VLDKG+V ESG H  L+A+ G YA+L+  Q  E
Sbjct: 529 LLMRGRTTIVIAHRLSTVVNADLIHVLDKGRVIESGDHNALMAKNGTYARLYAMQFAE 586