Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., ABC transporter transmembrane domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  289 bits (740), Expect = 3e-82
 Identities = 187/515 (36%), Positives = 283/515 (54%), Gaps = 26/515 (5%)

Query: 212 LALAIAEPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVR-E 270
           L LA A   Y   R         +V A++   L+  ++ L  +++   +TG++++R+  +
Sbjct: 115 LGLATAARYYFVTRT------GERVIADVRKGLFGRILTLDPSFYAHMRTGEVLSRLTTD 168

Query: 271 MAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVLW--LIAGPLI 328
           +A +   +T S    L + + +   +A++F  +  LT  V+  L++ F+L    I G  +
Sbjct: 169 IALVETLMTTSISYALRNFLTLIGGVALLFFVSPKLTGFVL--LIVPFLLGPIFIFGRKV 226

Query: 329 RKKVESEYESDANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNRSFDAQKSGL 388
           RK   +  +  ANA  F  E+V  IET++    E   + ++   +    N S    ++  
Sbjct: 227 RKLTVASQDRFANAVGFAGESVDAIETVQAFGREQSAITRFGAAVEDAFNASLTRMQARA 286

Query: 389 IAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQ 448
                I +V      L+LW G   V+KG +TPG L+ F +L+      V  L + W D Q
Sbjct: 287 WMTALIIVVMFGGVTLVLWLGAQDVVKGAMTPGALLQFVLLSVFAAGAVGALGESWGDVQ 346

Query: 449 HTLIALRRVGDILDEPRENSKQGLASVPELD-------GGIEFSNIRFRY--HQDAPEVL 499
               A+ R+ +++      +  G+A  P+         G +  S + F Y    D P  L
Sbjct: 347 KAAGAMERIEELM-----RAVAGIAPPPQATALPTPPRGEVSMSAVGFAYPGRPDLP-AL 400

Query: 500 ANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNM 559
              SL ++PG+ + + GPSG+GKST+ RLL R Y PQ G V VDG+D+  ADPV++R   
Sbjct: 401 KGFSLTVRPGETVALVGPSGAGKSTVFRLLLRFYDPQTGMVSVDGVDVRQADPVAVRDRF 460

Query: 560 SVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAA 619
           + V QE+ LFSGS  +NIR  +   + EE R  A+ A AL FI+ LP GF+ P+GE+G +
Sbjct: 461 AWVSQETPLFSGSALENIRFGRENTTLEEARVVAEKAQALGFIDALPEGFDTPLGERGKS 520

Query: 620 LSGGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRLN 679
           LSGGQRQR+A+ARAL+ +  ILLLDEATSALD  SE  +   +D+    RT + IAHRL 
Sbjct: 521 LSGGQRQRLAIARALVRDAPILLLDEATSALDAESERLVQVALDQAMEERTTLVIAHRLA 580

Query: 680 TIRHADNIFVLDKGQVAESGTHEELLAQQGLYAKL 714
           T+  AD I V+D G+V E GTHE+L+AQ GLYA+L
Sbjct: 581 TVLRADRIVVMDDGRVVEEGTHEQLVAQGGLYARL 615