Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  257 bits (656), Expect = 1e-72
 Identities = 156/414 (37%), Positives = 235/414 (56%), Gaps = 17/414 (4%)

Query: 167 LSRFRPLLERAISDIEHKEELQKLVEIRTRELRLAQKLAEQANQSKSNFLAMMSHELRTP 226
           LSR    L   ++    +++      I+TRE       AE+AN +KS+FLAMMSHELRTP
Sbjct: 226 LSRHINNLAEGLNQASREQQQAMAQLIQTREE------AERANNAKSDFLAMMSHELRTP 279

Query: 227 LNAVLGLIDILRG-ELTSYQVELLEQMENSAELLLIIINDILDLSRIESGHFSLHCHWLD 285
           +N VLG++ +L   E+T  Q E       S E LL +INDILD SRIE     L     +
Sbjct: 280 MNGVLGMLQLLETTEMTEEQTEYAALASESTEHLLKVINDILDFSRIERAALELEHIPFN 339

Query: 286 LEKKLDQSLVYHRQIAQDKGVHFYVQSNKN-PTLEYYTDSARLTQILFNIVGNAIKFTKQ 344
           L   ++      +  AQ +G+   +       TL    D  R+ QIL N++GNA+KFT+ 
Sbjct: 340 LADLINSCAQAFQHSAQQRGLALELSIPPGMDTLRVQGDPTRIRQILVNLIGNALKFTEH 399

Query: 345 GQVDV-----VLDYTKDGVVFRVKDTGIGIEKNRVEQLFTPFIQADNSITRNYGGTGLGL 399
           G V +      LD+        V+D+GIGI   R+E +F  F QAD+SI+R YGGTGLGL
Sbjct: 400 GNVSIEPHWQTLDHELVWFTCTVRDSGIGISAERLELMFDAFQQADSSISRRYGGTGLGL 459

Query: 400 AITKHLVELMGGTIQVESEFGIGTTFTLYIPLQSRLKNIKPSTSSSQQIVNV-KNHHILV 458
            I + L E MGGT++ +SE   G+ FTL IPL     ++    S +          H+L+
Sbjct: 460 PIARTLAERMGGTLRAQSEEARGSVFTLEIPLAIDQHSVPAIASDADGKTGAGDGRHVLL 519

Query: 459 VEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIAATK 518
           VED   N+ V++ +L  LG++V++A +G +A+   E + +F  +LMD  +P++DG  AT+
Sbjct: 520 VEDNPVNRAVVEAMLRSLGFEVSLATDGAEAIRSAE-SLIFTAILMDCRLPVIDGYEATR 578

Query: 519 ILRDKH--IEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDIMEVVKRFL 570
            +R      ++PIIALTA+    D++ C+ AGMND + KP +  D+ ++++R++
Sbjct: 579 QIRQLPGCADLPIIALTANALQGDREACLAAGMNDYLAKPFKRTDLQQILQRWV 632