Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., Sensor histidine kinase RcsC from Pseudomonas sp. DMC3

 Score =  266 bits (680), Expect = 2e-75
 Identities = 162/409 (39%), Positives = 244/409 (59%), Gaps = 21/409 (5%)

Query: 182 EHKEELQKLVEIRTRELRLA-------QKLAEQANQSKSNFLAMMSHELRTPLNAVLGLI 234
           +H   L + +E  +RE + A       ++ AE+AN +KS+FLAMMSHELRTP+N VLG++
Sbjct: 228 QHINNLAQALEQASREQQQAMAQLIQTREEAEKANNAKSDFLAMMSHELRTPMNGVLGML 287

Query: 235 DILRG-ELTSYQVELLEQMENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQS 293
            +L   E+T  QVE       S E LL +INDILD SRIE     L     +L + +   
Sbjct: 288 QLLETTEMTEEQVEYAALASESTEHLLKVINDILDFSRIERSELELEHIPFNLAELIGAC 347

Query: 294 LVYHRQIAQDKGVHFYVQSNKNPT-LEYYTDSARLTQILFNIVGNAIKFTKQGQVDVV-- 350
               +  A  +G+   ++   +   L+   D  R+ QIL N+VGNA+KFT+QG+V +   
Sbjct: 348 AQSFQHSAVQRGLALNLRIPDDMRGLQVQGDPTRIRQILVNLVGNALKFTEQGRVSIEAQ 407

Query: 351 ---LDYTKDGVVFRVKDTGIGIEKNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVE 407
              LD+        V+D+GIGI    +E +F  F QAD+SI+R YGGTGLGL I + L E
Sbjct: 408 WQSLDHELLWFTCSVRDSGIGISSESLELMFNAFQQADSSISRRYGGTGLGLPIARTLAE 467

Query: 408 LMGGTIQVESEFGIGTTFTLYIPLQSRLKNIKPSTSSSQQIVNV---KNHHILVVEDTKT 464
            MGGT++ +SE G G+ FTL IPL +  K   P+ ++ + +      +  H+L+VED   
Sbjct: 468 RMGGTLRAQSEEGRGSVFTLEIPL-ALYKQAMPALAAPRTLNGSGQGEGRHVLLVEDNPV 526

Query: 465 NQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIAATKILRD-- 522
           NQ VI+ +L  LG+ V++A +G QAV   E    F+++LMD  +PI+DG  AT+ +RD  
Sbjct: 527 NQTVIEAMLRSLGFAVSVATDGAQAVRSAEGGE-FEVILMDCRLPIIDGYEATRQIRDLP 585

Query: 523 KHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDIMEVVKRFLN 571
              ++PIIALTA+    D++ C+ AGMND + KP +  D+ ++++R+++
Sbjct: 586 GRRDVPIIALTANALQGDRETCLAAGMNDYLAKPFKRNDLQQILQRWVS 634