Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 970 a.a., response regulator from Pseudomonas fluorescens SBW25

 Score =  216 bits (549), Expect = 4e-60
 Identities = 133/372 (35%), Positives = 223/372 (59%), Gaps = 12/372 (3%)

Query: 195 TRELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDILR-GELTSYQVELLEQME 253
           T +L  A++ A  AN++K+ FLA MSHE+RTPL  VLG ++++   +++  Q + LE ++
Sbjct: 469 TLQLDQARQEATAANEAKTVFLATMSHEIRTPLYGVLGNLELMALTDMSERQRQYLEIIQ 528

Query: 254 NSAELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSN 313
            S+ +L  +I+++LD+S+IESG  ++        + +++S++     A++KG+    + +
Sbjct: 529 GSSTVLFQLISNVLDVSKIESGQMAVEAAPFSPRQLVEESVLGFAATARNKGLQIDAEID 588

Query: 314 KNPTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDV---VLDYTKDGVV--FRVKDTGIG 368
               L+   D+ R+ QIL N++GNAIKFT+ G+V +   V    +D V   ++V DTG+G
Sbjct: 589 PQVPLQLLGDAGRIRQILHNLLGNAIKFTESGRVRLRLTVQALLEDEVALQWQVTDTGVG 648

Query: 369 IEKNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTTFTLY 428
           I    +EQLF PF Q       N  G GLGL+I   L ELMGGT++V SE G+G++F+L+
Sbjct: 649 IPDKALEQLFKPFYQVAGGQDGN--GAGLGLSICSRLSELMGGTMRVVSEPGLGSSFSLF 706

Query: 429 I--PLQSRLKNIK-PSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAEN 485
           I  P+ S  +++  P  +         N  +LV ED   +Q V+Q  L  LG   T+A +
Sbjct: 707 ITLPILSSAESVAGPMLAEPCLDAPCLNVRVLVAEDNPVSQAVLQEQLEALGAQATVARD 766

Query: 486 GLQAVELLEKNHVFDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCI 545
           G  A+++   +  FDLV+ DI+MP ++G    + LR++ +++PII +TA+    + + C+
Sbjct: 767 GEHALQIW-GSQPFDLVITDINMPRLNGYDLARALREQGVQVPIIGVTANALREEGERCL 825

Query: 546 DAGMNDIVLKPI 557
             GMN  V+KP+
Sbjct: 826 AVGMNAWVVKPL 837