Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 890 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  189 bits (480), Expect = 4e-52
 Identities = 136/384 (35%), Positives = 207/384 (53%), Gaps = 22/384 (5%)

Query: 199 RLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDILRG-ELTSYQVELLEQMENSAE 257
           R AQ++AE+ANQ+K+ FLA MSHE+RTP+N V+G+  +L   +L   Q      + +SAE
Sbjct: 243 RQAQQVAERANQAKAAFLATMSHEIRTPMNGVIGMTGLLLDTQLDPEQRHFATTIRDSAE 302

Query: 258 LLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSNKNPT 317
            LL +INDILD S++E+G   L     +L   ++  +      A  KG+   + S  +P 
Sbjct: 303 SLLTVINDILDFSKLEAGKLDLESTDFELVGLVESIVDILAPRAHAKGIE--IASMVDPD 360

Query: 318 LEYYT--DSARLTQILFNIVGNAIKFTKQGQVDV-VLDYTK-DG---VVFRVKDTGIGIE 370
           L  +   D  RL QIL N+ GNAIKFT  G + + V D T  DG   + F V+DTGIGI 
Sbjct: 361 LPAWVRGDPGRLRQILMNLAGNAIKFTSHGGISIEVRDETSPDGAGRLRFDVRDTGIGIP 420

Query: 371 KNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTTFTLYIP 430
           ++ + +LF+ F+Q D S  R YGGTGLGLAI+K L E+MGGTI VES  G G+ F   +P
Sbjct: 421 QDAIGRLFSMFMQVDASTARRYGGTGLGLAISKRLTEMMGGTIGVESTPGAGSLFWFSLP 480

Query: 431 LQSRLKNIKPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAV 490
            Q          ++  Q  ++    ILVV+D+  N+ V++  L   G  V    +   A+
Sbjct: 481 FQM-------VETAPPQRPDLAGRRILVVDDSPINRDVLERQLRGFGVIVASCADAESAL 533

Query: 491 ELLEK----NHVFDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCID 546
             L +       ++  ++D  MP + G      +R + +  P+  + A + G   ++   
Sbjct: 534 AELGRAAATGTPWEAAIIDARMPGVTGSDLIGRIRAEPVLAPMGLIIASSQGLSPEDG-S 592

Query: 547 AGMNDIVLKPIRSKDIMEVVKRFL 570
              +  + KP+R + I+ V+ R L
Sbjct: 593 PKADAFIHKPLRRQTILAVLARVL 616



 Score = 92.0 bits (227), Expect = 9e-23
 Identities = 50/117 (42%), Positives = 74/117 (63%), Gaps = 4/117 (3%)

Query: 456 ILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIA 515
           ILV ED   NQ V   LL KLG+ V +A +G +AVE + ++  +DLVLMD+ MP MDG+ 
Sbjct: 644 ILVAEDNPVNQQVAVGLLRKLGHSVDVAADGAEAVEAV-RSRPYDLVLMDVQMPEMDGLQ 702

Query: 516 ATKILR---DKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDIMEVVKRF 569
           AT  +R        +PI+A+TA+    D + C+DAGM+  + KPI  + +MEV+ ++
Sbjct: 703 ATAAIRALTGGAERVPIVAMTANAMRGDDRMCLDAGMDRYISKPIDRRKLMEVLAQY 759