Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1329 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  217 bits (553), Expect = 2e-60
 Identities = 135/385 (35%), Positives = 227/385 (58%), Gaps = 19/385 (4%)

Query: 193  IRTRELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLID-ILRGELTSYQVELLEQ 251
            ++  EL+ A+ LAEQA+++KS FLA MSHE+RTPLN V+G  D +L+ +L+  Q + L  
Sbjct: 673  LQREELKKAKILAEQASKAKSEFLANMSHEIRTPLNGVIGFTDLVLKTDLSETQAQYLSI 732

Query: 252  MENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQ 311
            +  S   LL IINDILD S+IE+G   L     DL +  +Q+          KG+   + 
Sbjct: 733  VNQSGNALLNIINDILDFSKIEAGKLELDIDRCDLYELTEQTSDIITYEVHKKGLEMLLN 792

Query: 312  SNKNPTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDVVL------DYTKDGVV-FRVKD 364
             + +     + DS R+ QI+ N++GNA KFT++G++++ L      + +++ V+ F V+D
Sbjct: 793  IHPDIPRFIWVDSVRVKQIMVNLLGNASKFTEEGEIELQLYPIDKDEASREMVIRFSVRD 852

Query: 365  TGIGIEKNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTT 424
            TGIGI+  +  ++F  F Q D S T+ YGGTGLGL I+  L++LM   +Q+ S  G G+T
Sbjct: 853  TGIGIKAEKQTKIFEAFSQEDVSTTKKYGGTGLGLTISNRLLQLMHSGLQLHSTVGKGST 912

Query: 425  FTLYIPLQSRLKNIKPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAE 484
            F  Y  L  + +  +  T   ++ ++V+N  +L+V+D   N+M+I+ ++   G   + A+
Sbjct: 913  F--YFDLNVKYEYGERIT--LEEDLSVEN--VLIVDDNDNNRMIIERMMALRGISTSQAK 966

Query: 485  NGLQAVELLEKNHVFDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDK--- 541
            NG +A++   +   FD+VLMD  MP M+GI   + +R+     PII L  H++  D    
Sbjct: 967  NGFEAIQKFVEGEKFDVVLMDYHMPYMNGIETIRKIREIVDRQPIIFL--HSSSDDDKIL 1024

Query: 542  QNCIDAGMNDIVLKPIRSKDIMEVV 566
            + C + G+   ++KPI+ +++ + +
Sbjct: 1025 KACKELGVRKKLVKPIKLQEMYDAL 1049



 Score = 74.7 bits (182), Expect = 2e-17
 Identities = 39/118 (33%), Positives = 75/118 (63%), Gaps = 5/118 (4%)

Query: 456  ILVVEDTKTNQMVIQLLLNKLGYDVTIAE--NGLQAVELLEKNHVFDLVLMDISMPIMDG 513
            +L+VED   N ++ + +++ L     I E  NG +A+E++ K+ +  ++ MD+ MP M+G
Sbjct: 1079 VLIVEDNTINMLLAKTVIHNLSPATAILEAANGKEALEVM-KDELPSVIFMDVQMPEMNG 1137

Query: 514  IAATKILRDKHIE--IPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDIMEVVKRF 569
              AT+ +R K+ +  I IIALTA     +++ C+ AGMND + KP   +D++++++++
Sbjct: 1138 YEATQAIRKKYNKHNILIIALTAGNIKGEREKCMQAGMNDFIAKPFVEEDVIKLMEKW 1195