Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1172 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  223 bits (568), Expect = 3e-62
 Identities = 139/382 (36%), Positives = 219/382 (57%), Gaps = 21/382 (5%)

Query: 197 ELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLID-ILRGELTSYQVELLEQMENS 255
           +L+ + + AEQAN++KS FLA MSHE+RTPLN ++G  D +L+ EL   Q + L  +  S
Sbjct: 522 DLQQSMRHAEQANRAKSEFLANMSHEIRTPLNGIIGFSDLVLKTELNDRQEQYLSIVNQS 581

Query: 256 AELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSNKN 315
           A  LL IINDILD S+IE+G   L     DL + ++Q+      +   KG+   +  + N
Sbjct: 582 ANSLLNIINDILDFSKIEAGKLDLDIERYDLYELVEQASDIITYVIHQKGLEMLLNISPN 641

Query: 316 PTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDVVL----DYTKDG---VVFRVKDTGIG 368
                + DS RL Q+L N++GNA KFT +G++++ L    +  K+G   + F V+DTGIG
Sbjct: 642 IPRFAWIDSVRLKQVLVNLLGNASKFTDKGEIELKLTPLSNSNKNGEMDIRFSVRDTGIG 701

Query: 369 IEKNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTTFTLY 428
           I+  + +++F  F Q D S T+ YGGTGLGL I+  L++LMG  +Q+ S    G+TF  Y
Sbjct: 702 IKSEKQDKIFEAFSQEDVSTTKKYGGTGLGLTISNRLLQLMGSKLQLTSTPNRGSTF--Y 759

Query: 429 IPLQSRLKNIKPSTSSSQQIVNVKN-HHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGL 487
             L+     IK     +  +    N H IL+V+D   N+M+I+ +L   G     A+NG 
Sbjct: 760 FDLR-----IKCEDGQAIPLEGEPNLHKILIVDDNANNRMIIERMLALKGIQTVQAKNGY 814

Query: 488 QAVELLEKNHVFDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCI-- 545
           +A++ L     +D++LMD  MP ++GI   + +R    E PII L  H++  DK   +  
Sbjct: 815 EAIQRLVDGEEYDVILMDFQMPYLNGIDTARKIRANFKEQPIIFL--HSSSEDKTISLAS 872

Query: 546 -DAGMNDIVLKPIRSKDIMEVV 566
            +  +   ++KPI+ +D+ + +
Sbjct: 873 KELSIPHRLIKPIKMQDMYDAL 894



 Score = 78.6 bits (192), Expect = 1e-18
 Identities = 43/118 (36%), Positives = 75/118 (63%), Gaps = 5/118 (4%)

Query: 456  ILVVEDTKTNQMVIQLLLNKLGYDVTIAE--NGLQAVELLEKNHVFDLVLMDISMPIMDG 513
            IL VED   N ++ + +++ +    T+ E  NG QA+ELL+ N + D++ MD+ MP M+G
Sbjct: 924  ILFVEDNAINMLLGKTVIHNISPKTTVLEASNGKQALELLKVN-LPDMIFMDVQMPEMNG 982

Query: 514  IAATKILRD--KHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDIMEVVKRF 569
              ATKI+R   K+  + I ALTA     +K+ C++AGM+D + KP   +D++ +++++
Sbjct: 983  YEATKIIRKEYKNKNLLIFALTAGNLKGEKEKCMEAGMDDFIAKPFVEEDLIRLLEKW 1040