Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 956 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  224 bits (572), Expect = 9e-63
 Identities = 146/424 (34%), Positives = 238/424 (56%), Gaps = 35/424 (8%)

Query: 169 RFRPLLERAISDIEHKEELQKLVEIRTRELRLAQKLAEQANQSKSNFLAMMSHELRTPLN 228
           RF  L E  +  +      QKL E   + L+ A+++AE AN++KS FLA MSHE+RTP+N
Sbjct: 536 RFFKLDEERMISVGRDVTEQKLWE---KGLKEAKEVAEGANRAKSEFLASMSHEIRTPMN 592

Query: 229 AVLGLIDILRG-ELTSYQVELLEQMENSAELLLIIINDILDLSRIESGHFSLHCHWLDLE 287
            +LG+I +L   ++   Q  +++ +++S E LL+II DILD S+IE G   L        
Sbjct: 593 GLLGMIGLLEHTKMDDEQQSIVKVIKDSGESLLVIIKDILDYSKIEEGKLELELSSSKFR 652

Query: 288 KKLDQSL-VYHRQIAQDKGVHFYVQSNKNPTLEYYT--DSARLTQILFNIVGNAIKFTKQ 344
           ++L++ + ++   +    G    +  +  PT+  +   D+ +L+QILFNI+GNA+KFT +
Sbjct: 653 EELNKVINIFSGMVV---GKELSLNLDIAPTIPQWLILDNEKLSQILFNIIGNAVKFTPK 709

Query: 345 GQVDVVLDYTKDGVV-------FRVKDTGIGIEKNRVEQLFTPFIQADNSITRNYGGTGL 397
           G  DV +  + + ++       F VKDTG+GI K++++QL  PF Q          G+GL
Sbjct: 710 GG-DVSIKVSGEPILDKNFMLYFNVKDTGVGIPKSKIDQLINPFTQTGRGTAEEKSGSGL 768

Query: 398 GLAITKHLVELMGGTIQVESEFGIGT--TFTLYIPLQSRLKNIKPSTSSSQQIVNVKNHH 455
           GLAI   L+ELMGG++Q+ESE G G+  +FT++  +    + +             K  H
Sbjct: 769 GLAIANKLIELMGGSLQIESEVGKGSEFSFTVFARISDSEEKVGKDDYEKYAKEEYKLSH 828

Query: 456 --------ILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDIS 507
                   IL+ ED   N   ++LL+ +LGY V     G +AV+ ++K   +D++ MD  
Sbjct: 829 ISDKFPKEILLAEDNDINLKFMKLLMKQLGYSVDTVSTGEEAVKAVQKKR-YDMIFMDYQ 887

Query: 508 MPIMDGIAAT----KILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDIM 563
           MP+MDG+ A+    K+   K+I   II L+A+    D +   +AGM+D + KPI+ +D++
Sbjct: 888 MPVMDGLEASREIKKMKEGKYIR--IIGLSANVFKEDIERAYEAGMDDYLTKPIKIQDVV 945

Query: 564 EVVK 567
             +K
Sbjct: 946 MKIK 949