Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 702 a.a., Autoinducer 2 sensor kinase/phosphatase LuxQ from Alteromonas macleodii MIT1002

 Score =  248 bits (633), Expect = 6e-70
 Identities = 155/431 (35%), Positives = 245/431 (56%), Gaps = 22/431 (5%)

Query: 162 EAKETLSRFRPLLE--RAISDIEHKEELQKLVEIRTRELRLAQKLAEQANQSKSNFLAMM 219
           E +   SR  P++E  R +  I    ++ +L  +    L+    +AE A +++S FLA M
Sbjct: 259 ETRWLQSRAHPVMENDRCVKVIGATVDITQL-HMDKAMLQQKTDMAESALKARSEFLANM 317

Query: 220 SHELRTPLNAVLGLID-ILRGELTSYQVELLEQMENSAELLLIIINDILDLSRIESGHFS 278
           SHE+RTP++ V G+++ ++   L S Q+E       SA+ LL I+NDILD S+I+SG+ S
Sbjct: 318 SHEIRTPIHGVQGMLEALISSSLNSTQLEHASIAMKSADSLLNIVNDILDFSKIDSGNMS 377

Query: 279 LHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSNKNPTLEYYTDSARLTQILFNIVGNA 338
                 +L   +++ +    ++A +KG+   V +       +  D  R+ QIL N++ NA
Sbjct: 378 FEESPTNLADTIEEQVPMFTRLAHEKGIELSVSTKGVEGKTFIADKLRIGQILINLLNNA 437

Query: 339 IKFTKQGQVDVVLDYTKDGV-VFRVK----DTGIGIEKNRVEQLFTPFIQADNSITRNYG 393
           IKFTK+G+V V    T+ G   FRVK    D+GIGI + + + +F+PF+QA+NS  R YG
Sbjct: 438 IKFTKEGKVTVETKSTRYGKGRFRVKLIVTDSGIGISEQQQKLIFSPFVQAENSTQRRYG 497

Query: 394 GTGLGLAITKHLVELMGGTIQVESEFGIGTTFTLYIPLQSRLKNIKPSTSSSQQIVNVKN 453
           GTGLGL+I   +V+  GG I+V S+ G+G  F + + L           +     V + +
Sbjct: 498 GTGLGLSIVSQIVKHYGGKIEVCSDLGVGARFIVTLMLDDANAGTIAEKACGHNAVYIPS 557

Query: 454 HH------ILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVE----LLEKNHVFDLVL 503
                    L+VED + NQ+VI+  L ++G    +AENG +AVE     L+    + ++L
Sbjct: 558 KQELSAFKALIVEDNEINQLVIKEQLKEIGITADLAENGEEAVEKVKDALKGKSPYTIIL 617

Query: 504 MDISMPIMDGIAATKILR---DKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSK 560
           MD  MP+MDG+ ATK++R   DK  +IPIIALTA+    DK+ C+ +GM+D + KP+   
Sbjct: 618 MDCHMPVMDGLEATKLIRSMGDKARDIPIIALTANALTGDKEKCLKSGMDDFISKPVGVS 677

Query: 561 DIMEVVKRFLN 571
            + E + R L+
Sbjct: 678 RLKECLYRHLS 688