Pairwise Alignments

Query, 405 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., GfdT protein from Pseudomonas simiae WCS417

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 68/243 (27%), Positives = 107/243 (44%), Gaps = 19/243 (7%)

Query: 15  TTVSTQVDVYSCIHELQQSMDSNGLSNLICYFTEEYDAQLLSSMLKAAFPGIPIIGCSSC 74
           + +S   D      EL + +    L  ++ + +  YD Q L   L+A F  + ++GC+S 
Sbjct: 9   SAMSQATDAGQAAEELARQLLHPYLGFVLFFCSASYDLQALGQALQACFGNVRVVGCTSA 68

Query: 75  RGVMTQDGYFSNPAVGIMGIYDSPQAAYGTALI------SLCDNRPIPE-LIDQAIDNAL 127
            G +T +GY  N  V  MG ++    +  T LI      SL D + + E L+     N L
Sbjct: 69  -GEITPEGYGRN-CVTAMG-FNHAHFSIATELIDQVEHFSLIDAQQMVERLVGGCRSNTL 125

Query: 128 ESADRTGELPSLVLLHATPGIEEVLIEGIDNKFGSQVPIIGGSAA-DNFISQNWSIFTQE 186
             A   G   +L LL      EEV++  +    G  +P  GGSA  DNF++     F   
Sbjct: 126 --APIKGNTFALTLLDGLSSREEVVLAALSAALG-DIPHFGGSAGDDNFLTHTHVYF--N 180

Query: 187 GATDKGIALQLMFPSQSVFGGFSAGY-SPTEFSGVITKA--KGRVIEEIDNESASGLYKE 243
           GA   G A+ ++  +   F  F+  +  P     V+T A    R + E++ E A+  Y  
Sbjct: 181 GAFHSGAAVVVLVNTWLDFEVFTTHHILPRSEKLVVTGADSPSRRVFELNAEPAAEEYAR 240

Query: 244 WIG 246
            IG
Sbjct: 241 HIG 243