Pairwise Alignments

Query, 405 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 67/315 (21%), Positives = 126/315 (40%), Gaps = 25/315 (7%)

Query: 22  DVYSCIHELQQSMDSNGLSNLICYFTEEYDAQLLSSMLKAAFPGIPIIGCSSCRGVMTQD 81
           D +  + +L   + +  L+  + + ++ YD   L+  +        +IGC+S  G +T  
Sbjct: 20  DPFEAMADLVDQLGTEPLAGAVIFCSQHYDRDSLARAINLHSECTTVIGCTS-SGELTDA 78

Query: 82  GYFSNPAVGI-MGIYDSPQAAYGTALISLCDNRPIPELIDQAIDNALESADRTGELPSLV 140
           GY  +    I     D    ++    I   D     E++      A   + R G L + V
Sbjct: 79  GYDHDSLTAIGFPAADFCMTSHCFDDIDNFDPVAAREIVRTLAAQAERDSRRLGGLVNHV 138

Query: 141 LLHATPGI---EEVLIEGIDNKFGSQVPIIGGSAADNFISQNWSIFTQEGATDKGIALQL 197
            L    G+   EE+L   I +  G  +P+IGGS+ D+   +  +IF       +   + +
Sbjct: 139 ALFLVDGLSHREELLTMTIQDALG-DIPLIGGSSGDDLAFRQTAIFDGGRFHARAAVVAI 197

Query: 198 MFPSQSVFGGFSAGYSPTEFSGVITKA--KGRVIEEIDNESASGLYKEWIGDHSGIQITE 255
           +  ++ +    +  Y P     VIT A    R++ EI+ E A+  Y    G H+G ++  
Sbjct: 198 LSSTRPMHVFKAQHYQPGAAKMVITGAIPHERIVTEINAEPAAAEYLRLAG-HAGEELGM 256

Query: 256 QYLFEHVTRFPLGRVVGKEESCSTQYKLTHPVRRTENGGLEMFANVE------VGEQVSL 309
           ++   H    P+ R  G       +Y +        +G L  +  ++      +GE V  
Sbjct: 257 EFFAAHP---PMVRAGG-------EYHVRSIQSANADGSLTFYCAIDEGIVLNIGEPVDR 306

Query: 310 MTGSQNQLIERVTRV 324
           + G +    +   RV
Sbjct: 307 IAGMRQLFSDLHARV 321