Pairwise Alignments

Query, 405 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 53.9 bits (128), Expect = 8e-12
 Identities = 68/245 (27%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 15  TTVSTQVDVYSCIHELQQSMDSNGLSNLICYFTEEYDAQLLSSMLKAAFPGIPIIGCSSC 74
           + +S   D      +L + +    L  ++ + + EYD Q L   L+  F GI ++GC+S 
Sbjct: 11  SAMSQATDARLAAQDLARQLLHPHLGFVLFFCSAEYDLQALGEALEQDFGGIRLVGCTSA 70

Query: 75  RGVMTQDGYFSN--PAVGIMGIYDSPQAAYGTALI------SLCDNRPIPE-LIDQAIDN 125
            G +T  GY  N   AVG    +D    +  TALI      SL D + + E L+     N
Sbjct: 71  -GEITPLGYGRNCVTAVG----FDHRHFSIATALIDEMERFSLIDAQQMVERLVGTCRSN 125

Query: 126 ALESADRTGELPSLVLLHATPGIEEVLIEGIDNKFGSQVPIIGGSAA-DNFISQNWSIFT 184
            L  A   G   +L LL      EE+++  +    G  +P  GGSA  DN++++    + 
Sbjct: 126 TL--APIKGHSFALTLLDGLSSREEMVLAALSAALG-DIPHFGGSAGDDNYLNRTHVYY- 181

Query: 185 QEGATDKGIALQLMFPSQSVFGGFSAGY-SPTEFSGVITKAKG--RVIEEIDNESASGLY 241
             GA   G A+ ++  +   F  F+  +  P +   V+T A    R + E++ E A+  Y
Sbjct: 182 -GGAFHNGAAVVVLVNTWLDFEVFTTHHILPRQEKLVVTGADSAQRRVFELNAEPAAEEY 240

Query: 242 KEWIG 246
              IG
Sbjct: 241 ARHIG 245