Pairwise Alignments

Query, 405 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 59/253 (23%), Positives = 113/253 (44%), Gaps = 18/253 (7%)

Query: 28  HELQQSMDSNGLSNLICYFTEEYDAQLLSSMLKAAFPGIPIIGCSSCRGVMTQDGYFSNP 87
           +E+  S+  + +  L+ + +  +D   ++  + A FP + I+GC+S  G   ++GY +  
Sbjct: 38  NEILASVKCDEIELLLFHTSTLFDLDTVAKEISARFPHVNIVGCTSA-GEFNKNGYGTEK 96

Query: 88  AVGIMGIYDSPQAAYGTALISLCDNRPIPELIDQA--IDNALESADRTGELPSLVLLHAT 145
            + +  + +  + +  TAL+         E  D A  +  AL+  +R  +     ++   
Sbjct: 97  LLAVAFLKN--EFSIATALVPNLGEVNFDEAHDIASGLRRALQGRERRYDTEQHFVISVL 154

Query: 146 PGI---EEVLIEGIDNKFGSQVPIIGGSAADNFISQNWSIFTQEGATDKGIALQLMFPSQ 202
            G+   EE  +E     FG+ +P +GGSA D+   +   +F   G   +  A+ L+  + 
Sbjct: 155 DGLTRHEEHFLETFATAFGN-IPHLGGSAGDDLKLEATYVF-YNGEFHRDAAVLLLVGTG 212

Query: 203 SVFGGFSAGYSPTEFSG-VITKA--KGRVIEEIDNESASGLYKEWIGDHSGIQITEQYLF 259
             F  FS  +  +  S  V+T A  + R + EI+ E A+  Y   +G        E    
Sbjct: 213 KPFTVFSIDHINSPVSKLVVTHADPESRTVYEINGEPAAQYYASLLG-----MKAEDLTP 267

Query: 260 EHVTRFPLGRVVG 272
           +  + FPL  +VG
Sbjct: 268 DVFSMFPLAVMVG 280