Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., cytochrome oxidase subunit I from Pseudomonas simiae WCS417

 Score = 79.0 bits (193), Expect = 4e-19
 Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 22/260 (8%)

Query: 161 IYVANWFFGAFIITVAVLHI----VNSMALPVSMGKSYSIYAGAVDAM----VQWWYGHN 212
           ++V  W   AF++ +AV+ +    V  M + +  G S+   AG  D +    V W++GH 
Sbjct: 199 LFVWTWLITAFLL-IAVMPVLAGCVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHP 257

Query: 213 AVGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFW---ALISLYIWAGPHHLHYTALP 269
            V  ++   F G +   +P  + +P++ Y  S+V+     A +S  +WA  HH+    +P
Sbjct: 258 EVYIMILPAF-GAVSSIIPTFSRKPLFGY-TSMVYATASIAFLSFIVWA--HHMFVVGIP 313

Query: 270 DWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWH-KLRYDPILRFLIVSLSFYGMSTFEG 328
              +   M  +L++  P+   + N + T+   W   L ++  + F +  +  + +  F G
Sbjct: 314 LVGELFFMYATLLIAVPTGVKVFNWVSTM---WQGSLTFETPMLFAVAFVILFTIGGFSG 370

Query: 329 PMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHLIPRLFGQERMYSVSLINAH 388
            M++I   +   H T + + H H   +         S Y+ +P+  G   MY  +L   H
Sbjct: 371 LMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTG--HMYDETLGKLH 428

Query: 389 FWLATIGTVLYIVAMWISGV 408
           FWL+ +G  +    M   G+
Sbjct: 429 FWLSFVGMNMAFFPMHFVGL 448