Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., Cbb3-type cytochrome c oxidase subunit CcoN1 from Pseudomonas sp. DMC3

 Score =  780 bits (2013), Expect = 0.0
 Identities = 356/453 (78%), Positives = 408/453 (90%)

Query: 13  YNYTVVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPLHTNAVIFAF 72
           YNY VVRQF ++T++WGIVGM +GV +AAQLVWP+LNF+ PW ++ RLRPLHTNAVIFAF
Sbjct: 9   YNYKVVRQFAIMTVVWGIVGMGLGVFLAAQLVWPELNFNLPWTSFGRLRPLHTNAVIFAF 68

Query: 73  GTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYTSGKEYAELEW 132
           G  ALFA+S+Y VQRTCQT+LF   +  F FWGWQ +I+ AAI+LPLGYTS KEYAELEW
Sbjct: 69  GGCALFASSFYSVQRTCQTQLFAPQIAAFCFWGWQLVILLAAISLPLGYTSSKEYAELEW 128

Query: 133 PIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVNSMALPVSMGK 192
           PIDI I  VWVAYA+VFFGT+++RKT HIYV NWFFGAFIITVA+LHIVN++ LPVS  K
Sbjct: 129 PIDILITIVWVAYAIVFFGTIMQRKTKHIYVGNWFFGAFIITVAILHIVNNLELPVSFTK 188

Query: 193 SYSIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWALI 252
           SYS+YAGA DAMVQWWYGHNAVGF LTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWALI
Sbjct: 189 SYSVYAGATDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWALI 248

Query: 253 SLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWHKLRYDPILR 312
           +LYIWAGPHHLHYTALPDW QSLGMVMSL+L APSWGGMING+MTLSGAWHKLR DPILR
Sbjct: 249 TLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSDPILR 308

Query: 313 FLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHLIPR 372
           FL+VSL+FYGMSTFEGPMM+IKTVNALSHYTDWTIGHVH+GALGWVAM+SIG++YH+IP+
Sbjct: 309 FLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGALYHMIPK 368

Query: 373 LFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGTLTYSFVESVQ 432
           +FG+ +M+SV LINAHFWLATIGTVLYI +MW++G+ QGLMWRAVN DGTLTYSFVE++ 
Sbjct: 369 IFGKAQMHSVGLINAHFWLATIGTVLYIASMWVNGIAQGLMWRAVNEDGTLTYSFVETLV 428

Query: 433 ASYPFYTVRFIGGFIFLSGMFLMAYNAYKTISA 465
           AS+P + VR IGG IFLSGM LMAYN ++T+ A
Sbjct: 429 ASHPGFVVRLIGGAIFLSGMLLMAYNTWRTVRA 461