Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 730 a.a., cytochrome C oxidase Cbb3 from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  576 bits (1485), Expect = e-169
 Identities = 265/456 (58%), Positives = 340/456 (74%), Gaps = 2/456 (0%)

Query: 13  YNYTVVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPLHTNAVIFAF 72
           Y+  +VR F + T+ WGI GM +G LIA QL  P+LN  T + T+ R+RPLHTNAVIFAF
Sbjct: 31  YDNKIVRDFGIATVFWGIAGMLIGTLIAFQLARPELNMGTQYTTFGRIRPLHTNAVIFAF 90

Query: 73  GTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYTSGKEYAELEW 132
             +A+F   YY +QR C+TR++   L    FWGWQ IIVSA ITLPLG+T+ KEYAELEW
Sbjct: 91  VGNAIFMGVYYSLQRLCKTRMYSDWLSKINFWGWQLIIVSAVITLPLGFTTSKEYAELEW 150

Query: 133 PIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVNSMALPVSMGK 192
           PIDIAI  +WV +    FGT+ KR+  H+YVA WF+ A  +TVAVLHIVNS  +PV+  K
Sbjct: 151 PIDIAITLIWVVFGWNMFGTIAKRREKHLYVAIWFYIATFLTVAVLHIVNSYEMPVNFLK 210

Query: 193 SYSIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWALI 252
           SYS YAG  DA+VQWWYGHNAV F LT  FLG+MYYF+PK A RPVYSYRLSI+HFW+LI
Sbjct: 211 SYSGYAGVQDALVQWWYGHNAVAFFLTTPFLGLMYYFLPKAANRPVYSYRLSIIHFWSLI 270

Query: 253 SLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWHKLRYDPILR 312
            +YIWAGPHHL YT+LPDW QSLG+V S++L APSWGGMING++TL GAW K+R +PIL+
Sbjct: 271 FIYIWAGPHHLLYTSLPDWAQSLGVVFSVMLLAPSWGGMINGLLTLRGAWDKVRENPILK 330

Query: 313 FLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHLIPR 372
           F++V+++ YGM+TFEGPM+S+K VNA++H+TDW + HVH GALGW   ++   +Y L PR
Sbjct: 331 FMVVAITAYGMATFEGPMLSLKNVNAIAHFTDWIVAHVHVGALGWNGFLTFAMLYWLFPR 390

Query: 373 LFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGTLTY-SFVESV 431
           L+ +  +YSV L N HFWL T+G + Y + M+ +G  QGLMW+  + +G L Y +F+E+V
Sbjct: 391 LY-KTPLYSVKLANTHFWLGTLGILFYAIPMYWAGFTQGLMWKQFSEEGMLQYPNFLETV 449

Query: 432 QASYPFYTVRFIGGFIFLSGMFLMAYNAYKTISAPK 467
               P Y +R IGG ++LSG+FLM YN  KT  + K
Sbjct: 450 LQIVPMYYLRGIGGVLYLSGVFLMVYNLIKTAKSGK 485



 Score = 43.1 bits (100), Expect = 3e-08
 Identities = 72/355 (20%), Positives = 129/355 (36%), Gaps = 38/355 (10%)

Query: 66  NAVIFAFGTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYTSGK 125
           NAV F F T+      YY + +     ++   L    FW    I + A     L YTS  
Sbjct: 230 NAVAF-FLTTPFLGLMYYFLPKAANRPVYSYRLSIIHFWSLIFIYIWAG-PHHLLYTSLP 287

Query: 126 EYAELEWPIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVNSMA 185
           ++A+    +  ++  +  ++  +  G L  R        N      ++ +    +     
Sbjct: 288 DWAQ-SLGVVFSVMLLAPSWGGMINGLLTLRGAWDKVRENPILKFMVVAITAYGMATFEG 346

Query: 186 LPVSMGKSYSIYAGAVDAMVQWWYGHNAVGFLLTAGFL--GMMYYFVPKQAERPVYSYRL 243
             +S+         A+     W   H  VG L   GFL   M+Y+  P+  + P+YS +L
Sbjct: 347 PMLSLKN-----VNAIAHFTDWIVAHVHVGALGWNGFLTFAMLYWLFPRLYKTPLYSVKL 401

Query: 244 SIVHFWA--------LISLYIWAGP------HHLHYTALPDWTQSLGMVMSLVLFAPSWG 289
           +  HFW          I +Y WAG              +  +   L  V+ +V      G
Sbjct: 402 ANTHFWLGTLGILFYAIPMY-WAGFTQGLMWKQFSEEGMLQYPNFLETVLQIVPMYYLRG 460

Query: 290 GMINGIMTLSGAWHKLRYDPILRFLIVSLSFYGM----STFEGPMMSIKTVNALSHYTDW 345
             I G++ LSG +       ++ + ++  +  G        E P++     N   H+  W
Sbjct: 461 --IGGVLYLSGVF-------LMVYNLIKTAKSGKLVANERTEAPVVVPTASNNAGHWHSW 511

Query: 346 TIGHVHSGALGWVAMVSIGSVYHLIPRLFGQERMYSVSLINAHFWLATIGTVLYI 400
                   A+     + IG +   IP    +  + +++ +  +  L   G  LYI
Sbjct: 512 IEKRPTQMAIFATVAILIGGLVEFIPTFVIKSNVPTIASVKPYTSLELQGRDLYI 566