Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  754 bits (1946), Expect = 0.0
 Identities = 348/450 (77%), Positives = 392/450 (87%)

Query: 13  YNYTVVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPLHTNAVIFAF 72
           YN  VVRQF ++T++WG+VGM VGV+IAAQL WP LN    WL+Y RLRPLHTNAVIFAF
Sbjct: 13  YNDKVVRQFAIMTVVWGVVGMLVGVIIAAQLTWPALNLGIEWLSYGRLRPLHTNAVIFAF 72

Query: 73  GTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYTSGKEYAELEW 132
           G   LFA SYYVVQRTCQ RLFGG L  F+FWGWQA+I+ A ++LPLG TSGKEYAELEW
Sbjct: 73  GGCGLFAASYYVVQRTCQVRLFGGQLAAFSFWGWQAVILLAVVSLPLGMTSGKEYAELEW 132

Query: 133 PIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVNSMALPVSMGK 192
           PID+ I  VWVAYA+VFFGT+  RK  HIYVANWFFGAFI+ VAVLHIVNS ALPV + K
Sbjct: 133 PIDVLITLVWVAYAIVFFGTIGVRKVRHIYVANWFFGAFILAVAVLHIVNSAALPVDLFK 192

Query: 193 SYSIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWALI 252
           SYS YAG  DAMVQWWYGHNAVGF LTAGFLGMMYYF+PKQAERPVYSYRLSIVHFWALI
Sbjct: 193 SYSAYAGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFIPKQAERPVYSYRLSIVHFWALI 252

Query: 253 SLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWHKLRYDPILR 312
             Y+WAGPHHLHYTALPDWTQS+GMV SL+L APSWGGMINGIMTLSGAWHKLR DPILR
Sbjct: 253 FTYMWAGPHHLHYTALPDWTQSVGMVFSLILLAPSWGGMINGIMTLSGAWHKLRDDPILR 312

Query: 313 FLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHLIPR 372
           FLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWV +V++GS+Y+LIPR
Sbjct: 313 FLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVGLVTMGSMYYLIPR 372

Query: 373 LFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGTLTYSFVESVQ 432
           L+GQ++MYSV  I  HFW+AT+G VLYI AMWI+GVMQGLMWRAVN DG+LTY+FVESV+
Sbjct: 373 LYGQKKMYSVPAIELHFWIATLGIVLYIAAMWIAGVMQGLMWRAVNPDGSLTYTFVESVK 432

Query: 433 ASYPFYTVRFIGGFIFLSGMFLMAYNAYKT 462
           A++PFY +R +GG ++L+GM +M +N   T
Sbjct: 433 ATFPFYVIRLLGGVLYLAGMGVMLWNTVMT 462