Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., cytochrome c oxidase, subunit I from Kangiella aquimarina DSM 16071

 Score = 78.6 bits (192), Expect = 5e-19
 Identities = 60/259 (23%), Positives = 120/259 (46%), Gaps = 20/259 (7%)

Query: 161 IYVANWFFGAFIITVAVLHIVNSMALPVS---MGKSYSIYAGAVDAM----VQWWYGHNA 213
           ++V  W   AF++ + +  +  ++ + ++    G S+   AG  D +    + W++GH  
Sbjct: 187 LFVWTWLITAFLLVMVMPVLAGAVTMMLTDRHFGTSFFDAAGGGDPVMFQHIFWFFGHPE 246

Query: 214 VGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWALI---SLYIWAGPHHLHYTALPD 270
           V  ++   F G+    +P  + + ++ Y  S+V+  A I   S  +WA  HH+    +P 
Sbjct: 247 VYIMILPAF-GIASAIIPTFSRKKLFGYS-SMVYATASIAFLSFIVWA--HHMFTVGMPV 302

Query: 271 WTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWH-KLRYDPILRFLIVSLSFYGMSTFEGP 329
             +   MV ++++  P+   + N I T+   W   + Y+  + + I  +  + +  F G 
Sbjct: 303 KGELFFMVATMLIAVPTGVKVFNWIATM---WQGSITYETPMLYAIAFVILFTIGGFSGV 359

Query: 330 MMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHLIPRLFGQERMYSVSLINAHF 389
           M+++  V+   H T + + H H          ++ +VY+ +P+  G  RMY   L   HF
Sbjct: 360 MLALTPVDWQYHDTYFVVAHFHYVLFPGAIFGTMAAVYYWMPKWTG--RMYDEKLAKVHF 417

Query: 390 WLATIGTVLYIVAMWISGV 408
           WL+ +   L    M  SG+
Sbjct: 418 WLSIVFVNLTFFPMHFSGL 436



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 356 GWVAMVSIGSVYHLIPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMW 414
           G V   ++G    LIP + G   M    + N  FW+     +L + ++++ G      W
Sbjct: 74  GAVMPATVGLANWLIPMMIGAPDMALPRMNNWSFWILPAAFILLLSSLFMEGGAPNFGW 132