Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  808 bits (2086), Expect = 0.0
 Identities = 383/477 (80%), Positives = 419/477 (87%), Gaps = 2/477 (0%)

Query: 3   MSQEKQLEQNYNYTVVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRP 62
           MS+  Q + +YNY VVRQFT++TI+WGI+GM +GV IAAQL  P LNFDTPWLT+SRLRP
Sbjct: 1   MSEISQAQPDYNYKVVRQFTIMTIVWGIIGMGLGVFIAAQLFAPMLNFDTPWLTFSRLRP 60

Query: 63  LHTNAVIFAFGTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYT 122
           LHTNAVIFAFG  ALFATSYY+VQRTCQ RLF   L  FTFWGWQA+IV A ITLP+G T
Sbjct: 61  LHTNAVIFAFGGCALFATSYYIVQRTCQVRLFSDKLAAFTFWGWQAVIVLAVITLPMGLT 120

Query: 123 SGKEYAELEWPIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVN 182
           S KEYAELEWPIDI +A VWVAY + FFGTLV RK SHIYVANWF GAF++TVA+LHI N
Sbjct: 121 STKEYAELEWPIDILLALVWVAYIINFFGTLVIRKVSHIYVANWFLGAFMLTVAILHIGN 180

Query: 183 SMALPVSMGKSYSIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYR 242
           SMA+PVS  KSYS+YAGAVDAM+QWWYGHNAVGF LTAGFLGMMYYFVPKQA RPVYSYR
Sbjct: 181 SMAIPVSFTKSYSLYAGAVDAMMQWWYGHNAVGFFLTAGFLGMMYYFVPKQAGRPVYSYR 240

Query: 243 LSIVHFWALISLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAW 302
           LSIVHFWALISLYIWAGPHHLHYTALPDWTQSLGMVMS++LF PSWGGMINGIMTLSGAW
Sbjct: 241 LSIVHFWALISLYIWAGPHHLHYTALPDWTQSLGMVMSIILFVPSWGGMINGIMTLSGAW 300

Query: 303 HKLRYDPILRFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVS 362
           HKLR DP+LRFLIVSLSFYGMSTFEGPMM+IKTVNALSHYTDWTIGHVHSGALGWVAMVS
Sbjct: 301 HKLRTDPVLRFLIVSLSFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHSGALGWVAMVS 360

Query: 363 IGSVYHLIPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGT 422
           IGS+YHLIP LFGQ  MYS  L+N HFW ATIG VLYIVAMW+SGV+QGLMWRAVN+DGT
Sbjct: 361 IGSIYHLIPVLFGQRAMYSTKLVNVHFWFATIGVVLYIVAMWMSGVLQGLMWRAVNADGT 420

Query: 423 LTYSFVESVQASYPFYTVRFIGGFIFLSGMFLMAYNAYKTISAPKNSLKA--IVQPA 477
           LTYSFVES++AS PFY VRFIGG   ++GM +MAYN +KTI APK S+ A    QPA
Sbjct: 421 LTYSFVESLEASKPFYVVRFIGGCFVVAGMLVMAYNTWKTIRAPKGSIAADPATQPA 477