Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., cytochrome-c oxidase, FixN chain from Agrobacterium fabrum C58

 Score =  627 bits (1616), Expect = 0.0
 Identities = 282/449 (62%), Positives = 356/449 (79%), Gaps = 3/449 (0%)

Query: 17  VVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPLHTNAVIFAFGTSA 76
           VV+   + T+ WG+VG  VGV++A QL +P LN   P+  + R+RPLHT+AVIFAFG +A
Sbjct: 72  VVKYGVIATVFWGVVGFLVGVVVALQLAFPDLNI-APYFNFGRMRPLHTSAVIFAFGGNA 130

Query: 77  LFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYTSGKEYAELEWPIDI 136
           L ATS+YVVQRTC+ RLFGG L  F FWG+   I+ AA    LG T G+EYAE EW +DI
Sbjct: 131 LIATSFYVVQRTCRARLFGGNLGWFVFWGYNLFIIMAATGYLLGITQGREYAEPEWYVDI 190

Query: 137 AIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVNSMALPVSM--GKSY 194
            +  VWVAY   F GT++ RK  HIYVANWF+ +FI+T+A+LHIVN++A+PVS    KSY
Sbjct: 191 WLTIVWVAYLATFLGTILTRKEPHIYVANWFYLSFIVTIAMLHIVNNLAVPVSFLGVKSY 250

Query: 195 SIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWALISL 254
           S ++G  DA+ QWWYGHNAVGF LTAGFLGMMYYF+PKQ  RPVYSYRLSI+HFWALI +
Sbjct: 251 SAFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFIPKQVNRPVYSYRLSIIHFWALIFM 310

Query: 255 YIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWHKLRYDPILRFL 314
           YIWAGPHHLHYTALPDW Q+LGMV S++L+ PSWGGMING+MTLSGAW K+R DPI+R +
Sbjct: 311 YIWAGPHHLHYTALPDWAQTLGMVFSIMLWMPSWGGMINGLMTLSGAWDKIRTDPIVRMM 370

Query: 315 IVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHLIPRLF 374
           +++++FYGM+TFEGPMMSIK VN+LSHYTDWTIGHVHSGALGW  M++ G++Y+L P+L+
Sbjct: 371 VMAVAFYGMATFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWNGMITFGAIYYLTPKLW 430

Query: 375 GQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGTLTYSFVESVQAS 434
           G++R+YS+ L+N HFWLAT+G V+Y   MW++G+ Q LMWR  +S G L YSF ESV A 
Sbjct: 431 GRDRLYSLQLVNWHFWLATLGIVVYAAVMWVAGIQQALMWREYDSQGFLVYSFAESVAAL 490

Query: 435 YPFYTVRFIGGFIFLSGMFLMAYNAYKTI 463
           +P+Y +R +GG +FLSG  +MAYN   TI
Sbjct: 491 FPYYVMRALGGLMFLSGALIMAYNVTMTI 519