Pairwise Alignments

Query, 206 a.a., cytochrome-c oxidase, cbb3-type subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoO (EC 1.9.3.1) from Sphingobium sp. HT1-2

 Score =  226 bits (577), Expect = 2e-64
 Identities = 118/231 (51%), Positives = 148/231 (64%), Gaps = 30/231 (12%)

Query: 1   MSSNSNNRHELLERNVGLLAIFIVFAISWGALVEITPLIFQKQTTEEVQNLKPYTALQLE 60
           MSS    +H+ LERNV LL++F   A++ G +VEI PL +   T E+V+ ++PYT L+  
Sbjct: 1   MSSQLATQHKKLERNVTLLSVFAFIAVAIGGIVEIAPLFWIDSTVEKVEGMRPYTPLEQA 60

Query: 61  GRDIYIREGCNVCHSQMVRPFRSETERYGHYSVAGESVWEHPFLWGSKRTGPDLARVGGR 120
           GRDIY+REGC  CHSQM+RPFR E ERYGHYS+A ES+++HPF WGSKRTGPDLARVGGR
Sbjct: 61  GRDIYVREGCYTCHSQMIRPFRDEVERYGHYSLAAESMYDHPFQWGSKRTGPDLARVGGR 120

Query: 121 YSDEWHRVHLLNPRELVPESNMPAFPWLAKNTLDGKYTQQKMTLFRDKFGVPYTDEQIAN 180
           YSDEWH  HL +PR +VPES MP++ +LA   LD K    K+   R K GVPYT   I +
Sbjct: 121 YSDEWHVQHLKDPRSVVPESIMPSYAFLADTELDLKGIDGKIGALR-KVGVPYTKAMIDS 179

Query: 181 A-------------------------TKDVEGK----TEMDAIIAYLQSLG 202
           A                          +D +G     TEMDA++AYLQ LG
Sbjct: 180 AEADAKLQASSDGDAADLAKRYPKSQVRDFDGDPSRLTEMDAVVAYLQMLG 230