Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., cytochrome-c oxidase, cbb3-type subunit III from Rhodanobacter sp000427505 FW510-R12

 Score =  218 bits (554), Expect = 2e-61
 Identities = 127/326 (38%), Positives = 175/326 (53%), Gaps = 35/326 (10%)

Query: 1   MTTFWSLWIIVITVGTLLGCAILLVWCLKDKMGVEEGVDMGH--EYDGIRELNNPLPKWW 58
           M+T WS W++ + V  +     L +W  + K+        GH   +  +RE   PLP WW
Sbjct: 1   MSTGWSFWVMFLVVLNMGITFFLYLWGPRAKIPTLPDGTSGHVWAHGVLREGVRPLPLWW 60

Query: 59  TYLFIGTFIFAAIYLTLYPGLGSFKGILGWQSSDQTVRSLEESRASIAAAQQNKQLVQYS 118
             L    F+   +YL L+PG G+FKG+LGW S  +         A+  AA   K+     
Sbjct: 61  VLLSGAMFVAGFVYLALFPGFGNFKGVLGWTSHGEL--------ANAVAANDAKR----- 107

Query: 119 KELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDALKVGQRLFLQNCSQCHGSDARG 178
                  A   E FK          L  +  +A+D  AL++G+ LF  NC+ CH   A+G
Sbjct: 108 -------APLVERFK----------LYPVEQLASDPAALQMGKVLFEDNCAACHQRSAKG 150

Query: 179 QK--GFPNLTDDAWLYGGEPQAIVTTIRHGRIGQMPAWKDILGEQGVKEVVSYTLSLSGR 236
               G P+L+D+ WLYGG    I T+I  GR G MP W   LG   VK +  Y LSLSG 
Sbjct: 151 NVALGAPDLSDNDWLYGGSGSDITTSIHDGRSGVMPPWAS-LGADNVKNLAQYVLSLSGS 209

Query: 237 SVNAKEAEAGKARFAVCSACHGTDGKGNPAFGAPNLTDNDWLFGDSRAEVTETVMNGRSG 296
             +A +A AG+  FA C+ACHG DGKGN A GAPNLTD+ WL G S A++ +T+  GR G
Sbjct: 210 PHDAAKAAAGQPLFATCAACHGADGKGNQALGAPNLTDHIWLHGGSVADIEKTIGEGRQG 269

Query: 297 VMPAWINTLGEEKIQLVAAYVWSLSN 322
            MPAW   L +++I+++AAYV+  S+
Sbjct: 270 HMPAWSPRLSDDQIRVLAAYVYHQSH 295



 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 37/71 (52%), Positives = 52/71 (73%), Gaps = 1/71 (1%)

Query: 253 CSACHGTDGKGNPAFGAPNLTDNDWLFGDSRAEVTETVMNGRSGVMPAWINTLGEEKIQL 312
           C+ACH    KGN A GAP+L+DNDWL+G S +++T ++ +GRSGVMP W + LG + ++ 
Sbjct: 140 CAACHQRSAKGNVALGAPDLSDNDWLYGGSGSDITTSIHDGRSGVMPPWAS-LGADNVKN 198

Query: 313 VAAYVWSLSNS 323
           +A YV SLS S
Sbjct: 199 LAQYVLSLSGS 209