Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., cytochrome Cbb3 from Pseudomonas simiae WCS417

 Score =  251 bits (640), Expect = 2e-71
 Identities = 137/329 (41%), Positives = 190/329 (57%), Gaps = 31/329 (9%)

Query: 1   MTTFWSLWIIVITVGTLLGCAILLVWCLKDKMGVEEGVDMGHEYDGIRELNNPLPKWWTY 60
           MT FWS WI V+T+G+L+G   LLV   K +        MGH +DGI E +NPLP+WW  
Sbjct: 1   MTLFWSTWICVLTLGSLIGLTWLLVGTRKGETKGSVDQTMGHAFDGIEEYDNPLPQWWFM 60

Query: 61  LFIGTFIFAAIYLTLYPGLGSFKGILGWQSSDQTVRSLEESRASIAAAQQNKQLVQYSKE 120
           LF GT +FA  YL LYPGLG++KG+L       T                  Q  ++ KE
Sbjct: 61  LFAGTLVFAVGYLILYPGLGNWKGVLPGYQDGWT------------------QTKEWDKE 102

Query: 121 LDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDALKVGQRLFLQNCSQCHGSDARGQK 180
           +  A+A +G  F + +          + ++A D  ALK+G RLF  NC+ CHGSDA+G  
Sbjct: 103 MVKADAKFGPIFAKFSAMP-------VEEVAKDPQALKMGGRLFASNCAVCHGSDAKGAF 155

Query: 181 GFPNLTDDAWLYGGEPQAIVTTIRHGRIGQMPAWKDILGEQGVKEVVSY----TLSLSGR 236
           GFPNL D+ W +GG  +AI TTI +GR   MPAW D+LG++GVK V +Y       L   
Sbjct: 156 GFPNLADNIWRWGGSAEAIKTTILNGRHAAMPAWGDMLGDEGVKNVAAYVRHDVAKLPLP 215

Query: 237 SVNAKEAEAGKARF-AVCSACHGTDGKGNPAFGAPNLT-DNDWLFGDSRAEVTETVMNGR 294
           + +  +  AG+  F   C ACHG +G G  A GAP+LT    +++G S A++ +T+ +GR
Sbjct: 216 ADSTADLAAGQTAFNTTCVACHGPEGHGMEAMGAPDLTKPAGYIYGTSLAQLQQTIRHGR 275

Query: 295 SGVMPAWINTLGEEKIQLVAAYVWSLSNS 323
            G MPA     G +K+ L+AAYV+SLS++
Sbjct: 276 QGQMPAQEVLQGNDKVHLLAAYVYSLSHN 304