Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoP (EC 1.9.3.1) from Variovorax sp. SCN45

 Score =  247 bits (631), Expect = 2e-70
 Identities = 136/325 (41%), Positives = 181/325 (55%), Gaps = 32/325 (9%)

Query: 1   MTTFWSLWIIVITVGTLLGCAILLVWCLKDKMGVEEGVDMGHEYDG-IRELNNPLPKWWT 59
           ++ FWS ++ VI++ ++LGC ILL    + ++        GH +DG +RE NNPLP WW 
Sbjct: 5   ISRFWSNYVAVISLLSILGCVILLWLTARKRVAPSADNTTGHVWDGDLREANNPLPMWWV 64

Query: 60  YLFIGTFIFAAIYLTLYPGLGSFKGILGWQSSDQTVRSLEESRASIAAAQQNKQLVQYSK 119
            LF+ T +F   YL ++PGLGSF+G   W S         E  A +A A Q         
Sbjct: 65  GLFVLTIVFGLGYLAVFPGLGSFRGQSDWTSRG-------EYEAEVAKATQ--------- 108

Query: 120 ELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDALKVGQRLFLQNCSQCHGSDARGQ 179
           EL    A Y                  + +IA D  A  +G+RLF+ NC+QCHGSDARG 
Sbjct: 109 ELAPVYAKY--------------TAMPVEEIARDPQAHAIGERLFMGNCAQCHGSDARGS 154

Query: 180 KGFPNLTDDAWLYGGEPQAIVTTIRHGRIGQMPAWKDILG-EQGVKEVVSYTLSLSGRSV 238
           KGFP+LTD  WLYGG P+ I  +I  GR+G MP     +G    VK V +Y LSLSG   
Sbjct: 155 KGFPDLTDKDWLYGGTPERITESITKGRVGVMPPMAAAVGTSDDVKNVANYVLSLSGEPH 214

Query: 239 NAKEAEAGKARFAVCSACHGTDGKGNPAFGAPNLTDNDWLFGDSRAEVTETVMNGRSGVM 298
           ++  A  GK++F VC ACHG  G GN   GAPNL+D  WL G   A + + + +G+   M
Sbjct: 215 DSVRAGLGKSKFTVCVACHGVGGVGNQTLGAPNLSDKIWLHGYGEAAIIQMINSGKRNEM 274

Query: 299 PAWINTLGEEKIQLVAAYVWSLSNS 323
           PA    L E +I++VA+YVW LSNS
Sbjct: 275 PAQERRLTEAQIRMVASYVWGLSNS 299