Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoP (EC 1.9.3.1) from Sphingobium sp. HT1-2

 Score =  181 bits (460), Expect = 2e-50
 Identities = 109/302 (36%), Positives = 159/302 (52%), Gaps = 42/302 (13%)

Query: 40  MGHEYDGIRELNNPLPKWWTYLFIGTFIFAAIYLTLYPGL----GSFKGILGWQSSDQTV 95
           +GHE+DGI EL+ P+P+WW +    T I+   Y  LYP       + KG+LGW S +Q  
Sbjct: 15  VGHEWDGIEELDTPMPRWWLWTLYATIIWGIAYTVLYPAWPLVNSATKGVLGWSSREQ-- 72

Query: 96  RSLEESRASIAAAQQNKQLVQYSKELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSD 155
                    +A  ++ ++L +   +L         A  R+  +      R   D      
Sbjct: 73  ---------LAGEEEAERLRKEPLQL---------ALARIPIE------RLNEDSRLMQA 108

Query: 156 ALKVGQRLFLQNCSQCHGSDARGQKGFPNLTDDAWLYGGEPQAIVTTIRHG--------- 206
           A++ G+  F  +C QCHGS A G KG+PNL DD WL+GG+ + I TT+ HG         
Sbjct: 109 AVEGGRAAFKVHCVQCHGSGAAGSKGYPNLNDDDWLWGGDIKQIHTTLVHGIRQPGHAET 168

Query: 207 RIGQMPAW--KDILGEQGVKEVVSYTLSLSGRSVNAKEAEAGKARFAV-CSACHGTDGKG 263
           R+ QMPA+    IL  + V++VVS+   +S +   +  ++ G   FA  C+ CHG  G+G
Sbjct: 169 RMSQMPAFGRDGILTSEQVEDVVSHVRVISRQEKPSAASQRGAKLFADNCAVCHGAQGQG 228

Query: 264 NPAFGAPNLTDNDWLFGDSRAEVTETVMNGRSGVMPAWINTLGEEKIQLVAAYVWSLSNS 323
           +   GAPNL D+ WLFG  R  + +TV N R GVMPAW   L    ++++AAYV SL   
Sbjct: 229 DRKLGAPNLADSIWLFGGDREALAQTVNNSRYGVMPAWGARLDPVTVKMLAAYVHSLGGG 288

Query: 324 EN 325
           E+
Sbjct: 289 ED 290