Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., Cbb3-type cytochrome c oxidase subunit CcoP1 from Pseudomonas sp. RS175

 Score =  261 bits (667), Expect = 2e-74
 Identities = 143/333 (42%), Positives = 192/333 (57%), Gaps = 41/333 (12%)

Query: 1   MTTFWSLWIIVITVGTLLGCAILLVWCLKDKMGVEEGVDMGHEYDGIRELNNPLPKWWTY 60
           MTTFWS WI V+T+G+L+G   LL+   K +        MGH +DGI E +NPLP+WW  
Sbjct: 1   MTTFWSTWICVLTIGSLIGLTWLLIGTRKGETKGSVDQTMGHSFDGIEEYDNPLPQWWFL 60

Query: 61  LFIGTFIFAAIYLTLYPGLGSFKGIL-----GWQSSDQTVRSLEESRASIAAAQQNKQLV 115
           LF GT +F+  YL LYPGLG++KGIL     GW  +                        
Sbjct: 61  LFAGTLVFSVGYLVLYPGLGNWKGILPGYENGWTGAH----------------------- 97

Query: 116 QYSKELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDALKVGQRLFLQNCSQCHGSD 175
           ++ KE+  A+A +G  F + A          + ++A D  ALK+G RLF  NCS CHGSD
Sbjct: 98  EWEKEMAKADARFGPIFAKFA-------AMPVEEVAKDPQALKMGGRLFASNCSVCHGSD 150

Query: 176 ARGQKGFPNLTDDAWLYGGEPQAIVTTIRHGRIGQMPAWKDILGEQGVKEVVSYTL-SLS 234
           A+G  GFPNL D  W +GG  + I  TI  GR+  MPAW ++LG+ GVK V +Y    L+
Sbjct: 151 AKGAFGFPNLADSNWRWGGNAETIKATIMGGRMAAMPAWGEVLGDAGVKNVAAYVRHDLA 210

Query: 235 GRSVNA---KEAEAGKARF-AVCSACHGTDGKGNPAFGAPNLTD-NDWLFGDSRAEVTET 289
           G  + A    + EAGK  F   C ACHG  G+G  A GAPNLT    +++G S A++ +T
Sbjct: 211 GLPLPADSGADLEAGKQAFNTTCVACHGATGQGTEAMGAPNLTQPAGFIYGTSLAQLQQT 270

Query: 290 VMNGRSGVMPAWINTLGEEKIQLVAAYVWSLSN 322
           + +GR G MPA    LG +K+QL+AAYV+SLS+
Sbjct: 271 IRHGRQGHMPAQNELLGNDKVQLLAAYVYSLSH 303