Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Cbb3-type cytochrome c oxidase subunit CcoP2 from Pseudomonas sp. DMC3

 Score =  266 bits (680), Expect = 5e-76
 Identities = 147/332 (44%), Positives = 201/332 (60%), Gaps = 21/332 (6%)

Query: 1   MTTFWSLWIIVITVGTLLGCAILLVWCLKDKMGVEEGVDMGHEYDGIRELNNPLPKWWTY 60
           MTTFWSL++ V+++GT+     LL+   K +   +    +GH +DGI E +NPLPKWW  
Sbjct: 1   MTTFWSLYVTVLSLGTIFALTWLLLSTRKGQRSEQTDETVGHSFDGIEEYDNPLPKWWFM 60

Query: 61  LFIGTFIFAAIYLTLYPGLGSFKGIL-GWQSSDQTVRSLEESRASIAAAQQNKQLV-QYS 118
           LF+GT IFA  YL LYPGLG++KG+L G+   D       E + + A  Q     V ++ 
Sbjct: 61  LFVGTIIFALGYLVLYPGLGNWKGLLPGYNYLDT------EKQTAFANGQTGWTGVHEWE 114

Query: 119 KELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDALKVGQRLFLQNCSQCHGSDARG 178
           KE+  ++A +G  F + A          I ++A D  ALK+G RLF  NCS CHGSDA+G
Sbjct: 115 KEMARSDARFGPIFAKFAAMP-------IEEVAKDPQALKMGGRLFASNCSVCHGSDAKG 167

Query: 179 QKGFPNLTDDAWLYGGEPQAIVTTIRHGRIGQMPAWKDILGEQGVKEVVSYTL-SLSGRS 237
             GFPNLTD  W +GGEP+ I TTI  GR   MPAW +++GEQGV +V ++ + +L GR 
Sbjct: 168 AYGFPNLTDADWRWGGEPETIKTTIMGGRHAVMPAWAEVIGEQGVADVAAFVVTNLDGRK 227

Query: 238 V----NAKEAEAGKARFAVCSACHGTDGKGNPAFGAPNLT-DNDWLFGDSRAEVTETVMN 292
           +     A  A   K   A C ACHG  GKG PA GAP+LT    +++G S A++ +T+  
Sbjct: 228 LPEGTKADPANGQKLFAANCVACHGPAGKGTPAMGAPDLTHPGAFIYGSSFAQLQQTIRY 287

Query: 293 GRSGVMPAWINTLGEEKIQLVAAYVWSLSNSE 324
           GR G MPA     G +K+ L+AAYV+SLS+ E
Sbjct: 288 GRQGQMPAQEQLQGNDKVHLLAAYVYSLSHGE 319