Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., cytochrome c class i from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  101 bits (251), Expect = 4e-26
 Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 38/215 (17%)

Query: 35  EEGVDMGHEYDGIRELNNPLPKWWTYLFIGTFIFAAIYLTLYPGLGSFKGILGWQSSDQT 94
           ++ +   H++DGI+E +N LP WW Y+F  + +FA  Y+  +    S  G+L  Q  +  
Sbjct: 221 KDEIHSNHDFDGIQEYDNDLPPWWKYMFYVSIVFAIGYMLHFHVFNS--GLLQEQEYE-- 276

Query: 95  VRSLEESRASIAAAQQNKQLVQYSKELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADS 154
              LE  +A++ AA  +                           +  TN     ++  D+
Sbjct: 277 ---LEMQQAALFAASADND------------------------PNAVTNF----EVLTDA 305

Query: 155 DALKVGQRLFLQNCSQCHGSDARGQKGFPNLTDDAWLYGGEPQAIVTTIRHGRIGQ-MPA 213
            AL+ G+  FL NC+ CHG +A+G  G PNLTD+ WL+GG    I  T++ G   + M  
Sbjct: 306 AALESGKSTFLTNCAACHGQEAQGTVG-PNLTDEYWLHGGNVNDIFKTVKFGVPAKGMVP 364

Query: 214 WKDILGEQGVKEVVSYTLSLSGRS-VNAKEAEAGK 247
           W+  L +  + EV SY LSL G +  NAKE +  K
Sbjct: 365 WQGKLSKDQILEVSSYILSLQGTNPANAKEPQGEK 399



 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 7/88 (7%)

Query: 239 NAKEAEAGKARFAV-CSACHGTDGKGNPAFGAPNLTDNDWLFGDSRAEVTETVMNG--RS 295
           +A   E+GK+ F   C+ACHG + +G      PNLTD  WL G +  ++ +TV  G    
Sbjct: 304 DAAALESGKSTFLTNCAACHGQEAQGTVG---PNLTDEYWLHGGNVNDIFKTVKFGVPAK 360

Query: 296 GVMPAWINTLGEEKIQLVAAYVWSLSNS 323
           G++P W   L +++I  V++Y+ SL  +
Sbjct: 361 GMVP-WQGKLSKDQILEVSSYILSLQGT 387



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 25/122 (20%)

Query: 160 GQRLFLQNCSQCHG--SDARGQ--KGFPNLTDDAW-----------LYGGEPQAIVTTIR 204
           G+++F  NCS CH   +D  G   K      D+AW           +  G+P A     +
Sbjct: 35  GKKIFDANCSACHSIETDVVGPALKDVHKRRDEAWIKKFVKNSTEMIQSGDPTAKEVFEK 94

Query: 205 HGRIGQMPAWKDILGEQGVKEVVSYTLSLSGRSVNAKEAEAGKARFAVCSACHGTDGKGN 264
           +G++ QM ++   L +  +  V++Y           +E+E   A  A  +A  GT+ +  
Sbjct: 95  YGKV-QMASFGGQLSDSDIDNVIAYV---------KEESEKPAAAAATPAADSGTEAEAA 144

Query: 265 PA 266
            A
Sbjct: 145 AA 146