Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., cytochrome-c oxidase, cbb3-type subunit III from Magnetospirillum magneticum AMB-1

 Score =  142 bits (357), Expect = 1e-38
 Identities = 98/304 (32%), Positives = 137/304 (45%), Gaps = 53/304 (17%)

Query: 41  GHEYDGIRELNNPLPKWWTYLFIGTFIFAAIYLTLYPGL----GSFKGILGWQSSDQTVR 96
           GHE+DGI+ELN PLPKWW Y+F  T ++A  Y   YP      G  KG LG+ S  +   
Sbjct: 16  GHEWDGIKELNTPLPKWWVYVFWATVLWAIGYWVAYPAWPLVNGYTKGTLGYSSRGELDN 75

Query: 97  SLEESRASIAAAQQNKQLVQYSK-ELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSD 155
            L        AAQ+  +    SK E  D  A                       I  D D
Sbjct: 76  EL--------AAQKKSRSAWLSKIEASDVAA-----------------------IEKDKD 104

Query: 156 ALKV----GQRLFLQNCSQCHGSDARGQKGFPNLTDDAWLYGGEPQAIVTTIRHG----- 206
            L+     G+  F +NC  CHG    G  G+P L DD WL+GG    I  TI+ G     
Sbjct: 105 LLRYAMAGGKIAFNENCGACHGVGGVGAYGYPTLADDEWLWGGTLADIEQTIKFGVRNTN 164

Query: 207 ---RIGQMPAW--KDILGEQGVKEVVSYTLSLSGRSVNAKEAEAGKARFAV-CSACHGTD 260
              R  +MP +    +L  + +  V  Y +SL+ ++    +  AG+  +A  C+ CH  D
Sbjct: 165 ANSRQSEMPKFGVDGVLKPEQIAAVSDYVVSLASKA--PAKGSAGETVYAENCAVCHAED 222

Query: 261 GKGNPAFGAPNLTDNDWLFGDSRAEVTETVMNGRSGVMPAWINTLGEEKIQLVAAYVWSL 320
           G G  A GAP L +  WL+  ++  +   V   + G MPAW   L    I+++A YV +L
Sbjct: 223 GSGMAAVGAPALNNQIWLYKGTKDAIVAQVNKPKHGSMPAWSERLDASTIKMLAVYVHNL 282

Query: 321 SNSE 324
              +
Sbjct: 283 GGGK 286