Pairwise Alignments

Query, 250 a.a., transcriptional regulator FNR from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases from Variovorax sp. SCN45

 Score = 60.8 bits (146), Expect = 3e-14
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 1/216 (0%)

Query: 20  CQDCSISQLCIPFTLNESELDQLDQIIERKKPIQKGQELFKAGDELRSLYAIRSGTIKSY 79
           C  C++ QL      ++ EL  +       + ++ G  + +       L+ + SG    Y
Sbjct: 19  CDQCALRQLAAFLPASDEELKTIQSFRVGTRRVEAGNSVIEEHRPSSQLFTLYSGWAFRY 78

Query: 80  TITEQGDEQITAFHLAGDLVGFDAITGDQHPSFAQALETSMVCEIPYEILDDLSGKMPKL 139
                G  QI +F L GD VG      D      +A+    +C    + L  L    PKL
Sbjct: 79  KTLSDGRRQILSFLLPGDFVGLQDEFADGQTHGVEAVTDVTLCAFSRDRLWGLFHAQPKL 138

Query: 140 RQQIMRLMSNEIKGDQEMILLLSKKNAEERLAAFLYNLSTRFSQRGFSPREF-RLTMTRG 198
              I  L + E K   + ++   ++NA ER+A  L +L  R  + G     +      + 
Sbjct: 139 GYDITWLAAREEKMVDDNLVTAGRRNAGERVAMLLMHLYRRAERVGMVRDGWVEFPFNQQ 198

Query: 199 DIGNYLGLTVETISRLLGRFQKSEILSVKGKYITIL 234
            I + LGL++   ++ + R Q+     +   ++ I+
Sbjct: 199 HIADALGLSLVHTNKTMRRLQRLGFYKIDTGWLRIM 234