Pairwise Alignments

Query, 315 a.a., universal stress protein UspE from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., universal stress protein from Pseudomonas simiae WCS417

 Score =  109 bits (272), Expect = 9e-29
 Identities = 85/307 (27%), Positives = 139/307 (45%), Gaps = 9/307 (2%)

Query: 1   MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERD 60
           MS   ++L++A       PA  RA  LA+      HI  F   Y  +  +  + + E+  
Sbjct: 1   MSQIQRLLLIAPPAMIRTPAFERATALARAMQLPLHIVAF--DYLQALAVAGLFAPEQMG 58

Query: 61  AMRKGVIHQREQWMRSIAEPYLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRK 120
             R+G +    QW+   AE      V    +VVW   PYE I+  +      ++IK   +
Sbjct: 59  VAREGYLQTHRQWLAEQAELMSKHGVAVSSEVVWVQHPYEEILHFVSELPLALIIKDAHE 118

Query: 121 HDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHVGSELDTHIDLNDRMVE 180
              L+ + FTP DW L+R CP PV LV N        I+A V V    +     ND++++
Sbjct: 119 ESALKRIFFTPLDWQLLRDCPVPVHLVINDLHARPRQILAIVDVLRSEEQDQVFNDQIID 178

Query: 181 QLLNLSKRLGASPYLVNAYPVTPANITI----ELPEFDPTTYTDAVRGHHLTAMKALRQK 236
             + L+++ GA+  LV+ Y       T      LP    T   +A+      A  AL ++
Sbjct: 179 AAVKLAEQCGATLELVHVYDWMAVYATDMGVGALPL--ATGLYEALGSAEREAFAALAER 236

Query: 237 HGLSEEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCD 296
           H ++ +     +G     I E A +    ++++GT    GLS + +G TAE ++ +  C 
Sbjct: 237 HHVAPQNRHFIEGAAVPGICEFATKHATDVIVMGTVQHHGLSKL-LGTTAEQLLHRAPCS 295

Query: 297 VLALKPN 303
           V A+KP+
Sbjct: 296 VWAIKPS 302