Pairwise Alignments

Query, 315 a.a., universal stress protein UspE from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., universal stress protein UspA from Pseudomonas simiae WCS417

 Score =  114 bits (286), Expect = 2e-30
 Identities = 85/312 (27%), Positives = 146/312 (46%), Gaps = 35/312 (11%)

Query: 1   MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERD 60
           M     ILVV +  H E  AL RA  +A  + +  H    L + D  ++ +++L+L +  
Sbjct: 1   MQAIRSILVVIEPEHSESLALKRAKLIAGVTGAHLH----LLVCDKKHEHSALLALLKSG 56

Query: 61  AMRKGVIHQREQWMRSIAEPYLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRK 120
               G     EQ                     W+   +E II    A    ++IK    
Sbjct: 57  LHEDGYSVSTEQ--------------------AWNASLHETIIDVQQAEGCGLVIKQHFP 96

Query: 121 HDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHVGSELDTHIDLNDRMVE 180
              L+  + TP DW L+R CPT VLLVK A       I+A++ VG+    H  L++ +++
Sbjct: 97  DSPLKKALLTPADWKLLRYCPTAVLLVKTAKPWTGGVILAAIDVGNTDGEHRSLHNAIID 156

Query: 181 QLLNLSKRLGASPYLVNAYP---VTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKH 237
              +++    A  ++++A+P   ++ A+ T +L E         +   +    KA + + 
Sbjct: 157 HGFDIASLAKAQLHVISAHPSPMLSAADPTFQLKE--------TIEARYREQCKAFQAEF 208

Query: 238 GLSEEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDV 297
            + +    +++G  + +IP AA +  AA+ I+GT  RTG++   IGNTAE ++D +  DV
Sbjct: 209 DVDDSHLHIEEGPADVLIPFAAHKWQAAVTIIGTVARTGITGALIGNTAEVILDAVESDV 268

Query: 298 LALKPNGYVSPL 309
           L LKP+  +  L
Sbjct: 269 LVLKPDTLMDQL 280