Pairwise Alignments

Query, 315 a.a., universal stress protein UspE from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., Universal stress protein E from Pseudomonas sp. DMC3

 Score =  120 bits (301), Expect = 4e-32
 Identities = 89/305 (29%), Positives = 143/305 (46%), Gaps = 35/305 (11%)

Query: 1   MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERD 60
           M     ILVV +  H E  AL RA  +A     V+     L + D  +D   +LS+ +  
Sbjct: 1   MQAIRSILVVIEPEHAESLALKRAKLIA----GVTQAHLHLLVCDKKHDHAGLLSVLKAA 56

Query: 61  AMRKGVIHQREQWMRSIAEPYLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRK 120
            + +G     EQ                     W+   +E II    A    ++IK    
Sbjct: 57  LLAEGYSVTTEQ--------------------AWNESLHETIIDVQQAEGCGLVIKQHFP 96

Query: 121 HDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHVGSELDTHIDLNDRMVE 180
              L+  + TP DW L+R CPTPVLLVK A   ++  I+A+V VG+    H  L+  +++
Sbjct: 97  DSSLKKALLTPADWKLLRHCPTPVLLVKTAGSWKDKVILAAVDVGNADGEHRHLHSTIID 156

Query: 181 QLLNLSKRLGASPYLVNAYP---VTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKH 237
              +++    A  +++ A+P   ++ A+ T +L       Y +  R        A + + 
Sbjct: 157 HGYDIASLAKAHLHVITAHPSPMLSAADPTFQLKSTIEAKYREQCR--------AFQAEF 208

Query: 238 GLSEEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDV 297
            + +E   +++G  + +IP  A +L AA+ ++GT  R+GLS   IGNTAE V+D +  DV
Sbjct: 209 DVDDEHLHIEEGPADVLIPFMAHKLQAAVTVIGTVARSGLSGALIGNTAEAVLDTLESDV 268

Query: 298 LALKP 302
           L LKP
Sbjct: 269 LVLKP 273