Pairwise Alignments

Query, 315 a.a., universal stress protein UspE from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., universal stress protein A from Pseudomonas fluorescens SBW25

 Score =  115 bits (288), Expect = 1e-30
 Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 35/312 (11%)

Query: 1   MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERD 60
           M     ILVV +  H E  AL RA  +A  + +  H    L + D  ++ +++L+L +  
Sbjct: 1   MQAIRSILVVIEPEHSESLALKRAKLIAGVTGAHLH----LLVCDKKHEHSALLALLKSG 56

Query: 61  AMRKGVIHQREQWMRSIAEPYLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRK 120
               G     EQ                     W++  ++ II    A    ++IK    
Sbjct: 57  LQEDGYSVTTEQ--------------------AWNDSLHDTIIDVQQAEGCGLVIKQHFP 96

Query: 121 HDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHVGSELDTHIDLNDRMVE 180
              L+  + TP DW L+R CPT VLLVK A       I+A++ VG+    H  L+  +++
Sbjct: 97  DSPLKKALLTPADWKLLRYCPTAVLLVKTATPWAGGVILAAIDVGNTDGEHRSLHTSIID 156

Query: 181 QLLNLSKRLGASPYLVNAYP---VTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKH 237
              +++    A  ++++A+P   ++ A+ T +L E         +   +    KA + + 
Sbjct: 157 HGFDIASLAKAQLHVISAHPSPMLSAADPTFQLKE--------TIEARYREQCKAFQAEF 208

Query: 238 GLSEEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDV 297
            + E    +++G  + +IP     L AA+ I+GT  RTG+S   IGNTAE ++D +  DV
Sbjct: 209 DVDESHLHIKEGPADVLIPHLVHTLQAAVTIIGTVARTGISGALIGNTAEVILDAVESDV 268

Query: 298 LALKPNGYVSPL 309
           L LKP   +  L
Sbjct: 269 LVLKPQALMDHL 280