Pairwise Alignments

Query, 310 a.a., tRNA 2-thiocytidine(32) synthetase TtcA from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., tRNA(Cytosine32)-2-thiocytidine synthetase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  477 bits (1227), Expect = e-139
 Identities = 228/311 (73%), Positives = 270/311 (86%), Gaps = 7/311 (2%)

Query: 4   QTQELTKAQQYNFNKLQKRIRRNTGQAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSL 63
           + Q+ TK +QYN NKLQKR+RRN G+AIADFNMIE+GDRIMVCLSGGKDS+TML+IL +L
Sbjct: 3   EIQKNTKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNL 62

Query: 64  QKSAPISFELVAVNLDQKQPGFPEHVLPEYLESLGVEYKIVEEDTYAIVQDKVPEGKTTC 123
           Q+SAPI+F LVAVNLDQKQPGFPEH+LP YLE LGVEYKIVEE+TY IV++K+PEGKTTC
Sbjct: 63  QQSAPINFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTC 122

Query: 124 ALCSRLRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVSDNGEH 183
           +LCSRLRRGILYRTA ELGATKIALGHHRDDIL+TLFLNMFYGGKMKGMPPKL+SD+G+H
Sbjct: 123 SLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKH 182

Query: 184 VVIRPLAYCREKDIIKYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETM 243
           +VIRPLAYCREKDII++++ + +PIIPCNLCGSQPNLQRQ +  ML DWDKR+PGRIETM
Sbjct: 183 IVIRPLAYCREKDIIRFAEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETM 242

Query: 244 FRAMQNVVPSHLADFSLFDFKSIDKNSGVINGGDIGFDKEEIAPQVV----EDEDLVMEF 299
           F AMQNVVPSHL D +LFDFK I   S V++GGD+ FD+EEI  Q      E++D  +E 
Sbjct: 243 FSAMQNVVPSHLCDTNLFDFKGITHGSEVVDGGDLAFDREEIPLQPAGWQPEEDDTALE- 301

Query: 300 DPSLQLNVTNI 310
             +L+L+V  +
Sbjct: 302 --ALRLDVIEV 310