Pairwise Alignments

Query, 310 a.a., tRNA 2-thiocytidine(32) synthetase TtcA from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., tRNA 2-thiocytidine(32) synthetase TtcA from Escherichia coli ECOR38

 Score =  479 bits (1234), Expect = e-140
 Identities = 232/313 (74%), Positives = 270/313 (86%), Gaps = 9/313 (2%)

Query: 3   AQTQELTKAQQYNFNKLQKRIRRNTGQAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMS 62
           ++ QE++K +QYN NKLQKR+RRN G+AIADFNMIE+GDRIMVCLSGGKDS+TML+IL +
Sbjct: 2   SKNQEISKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRN 61

Query: 63  LQKSAPISFELVAVNLDQKQPGFPEHVLPEYLESLGVEYKIVEEDTYAIVQDKVPEGKTT 122
           LQ+SAPI+F LVAVNLDQKQPGFPEHVLPEYLE LGVEYKIVEE+TY IV++K+PEGKTT
Sbjct: 62  LQQSAPINFSLVAVNLDQKQPGFPEHVLPEYLEKLGVEYKIVEENTYGIVKEKIPEGKTT 121

Query: 123 CALCSRLRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVSDNGE 182
           C+LCSRLRRGILYRTA ELGATKIALGHHRDDIL+TLFLNMFYGGKMKGMPPKL+SD+G+
Sbjct: 122 CSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGK 181

Query: 183 HVVIRPLAYCREKDIIKYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIET 242
           H+VIRPLAYCREKDI +++D + +PIIPCNLCGSQPNLQRQ +  ML DWDKR+PGRIET
Sbjct: 182 HIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIET 241

Query: 243 MFRAMQNVVPSHLADFSLFDFKSIDKNSGVINGGDIGFDKEEIAPQVV-----EDEDLVM 297
           MF AMQNVVPSHL D +LFDFK I   S V+N GD+ FD+EEI  Q       EDE+ + 
Sbjct: 242 MFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNRGDLAFDREEIPLQPAGWQPEEDENQLD 301

Query: 298 EFDPSLQLNVTNI 310
           E    L+LNV  +
Sbjct: 302 E----LRLNVVEV 310