Pairwise Alignments

Query, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

 Score =  269 bits (688), Expect = 8e-77
 Identities = 149/344 (43%), Positives = 220/344 (63%), Gaps = 8/344 (2%)

Query: 20  LSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLDDQ 79
           L  I K +D    + +++L ++ GE + +LGPSGCGKTT LRM+ GF    +G+IL+  +
Sbjct: 6   LQSIVKRYDAMTAVDHVSLTISEGELVALLGPSGCGKTTTLRMVGGFIPVTEGRILVGGR 65

Query: 80  DVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRLAE 139
           D+T +P  +R++   FQ+YALFPHM+V ENVAFGL M+K+P++EI  +V  AL  V+L+ 
Sbjct: 66  DLTHLPPNKRNMGFGFQNYALFPHMSVAENVAFGLEMRKLPKAEIMAKVKTALDRVKLSH 125

Query: 140 MAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQLGI 199
           +A+R P QLSGGQQQR+A+ARA+V +P VLLLDE LS LD +LR +M++E++ LQ+QLGI
Sbjct: 126 LAERLPKQLSGGQQQRVALARALVIEPDVLLLDEPLSNLDAQLRHEMKTEIRTLQQQLGI 185

Query: 200 TFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQATTI 259
           T IFVTHDQ+EALS++DR+++MR+GKIEQ GSP +++  P + F A F+G  N+      
Sbjct: 186 TTIFVTHDQDEALSVADRVVLMRAGKIEQQGSPDDLFGRPASRFAAEFMGVTNLLPG--- 242

Query: 260 DRIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPEDLRIEEIKESEEKGIVGHVTDR 319
           +     R R  + G E +  +   V  G  L + LRPE L + +  E +   +   V   
Sbjct: 243 ELAGVGRFR--LAGGEEVRVH--PVGVGGDLSLALRPERLAL-DADERDHNALPAVVDLA 297

Query: 320 TYKGMTLESVVELESGMCVMVSEFFNEDDPDVDHSIGQKVAVTW 363
           TY+G+ ++  V   SG+ ++                GQ V V+W
Sbjct: 298 TYRGLVIDYRVATASGLVLIARRPSPAVGGPAPLKPGQPVRVSW 341