Pairwise Alignments

Query, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., polyamine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  279 bits (714), Expect = 7e-80
 Identities = 159/358 (44%), Positives = 212/358 (59%), Gaps = 25/358 (6%)

Query: 18  IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77
           ++ + +S+ F   + +  +++D+  GEF ++LGPSG GKTT LR+IAGFE    G I + 
Sbjct: 5   VQFTHVSRQFGEVKAVDRVSIDIQDGEFFSMLGPSGSGKTTCLRLIAGFEQPSAGSIRIH 64

Query: 78  DQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRL 137
            ++   +P  QR VNTVFQ YALFPHM V +NVA+GL+++ V ++E   R  EAL MV L
Sbjct: 65  GEEAAGLPPYQRDVNTVFQDYALFPHMNVRDNVAYGLKVKGVGKTERMNRAEEALGMVAL 124

Query: 138 AEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQL 197
                RKP QLSGGQ+QR+A+ARA+VN+P+VLLLDE L ALD KLR+QMQSELK+LQRQL
Sbjct: 125 GGYGDRKPVQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQSELKKLQRQL 184

Query: 198 GITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQAT 257
           GITFIFVTHDQ EALSMSDR+ V   G+IEQ  +PR +Y  P   FVA F+G  NV +  
Sbjct: 185 GITFIFVTHDQTEALSMSDRVAVFNKGRIEQVDTPRNLYMKPATSFVAEFVGTSNVIRGE 244

Query: 258 TIDRIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPEDLRIEE-IKESEEKGIVGHV 316
              R+                        G      +RPE +R  E    + E  I G +
Sbjct: 245 LAQRL-----------------------GGTAQPFSIRPEHVRFAEGPLGTGEVEISGLL 281

Query: 317 TDRTYKGMTLESVVELESGMCVMVSEFFNE-DDPDVDHSIGQKVAVTWVESWEVVLND 373
            D  Y+G      ++LE+G  + +S   N+  D    H +GQ +   W     V L D
Sbjct: 282 HDIQYQGSATRYELKLENGQALNISRANNQWLDTTAGHQVGQTLTARWAREAMVPLTD 339