Pairwise Alignments

Query, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., predicted polyamine ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  275 bits (703), Expect = 1e-78
 Identities = 154/360 (42%), Positives = 216/360 (60%), Gaps = 25/360 (6%)

Query: 18  IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77
           ++ + +S++F   + +  +++D+  GEF ++LGPSG GKTT LR+IAGFE    G I + 
Sbjct: 5   VQFTQVSRTFGEVKAVDQVSIDIIDGEFFSMLGPSGSGKTTCLRLIAGFEQPSSGSIRIQ 64

Query: 78  DQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRL 137
             +   +P  QR VNTVFQ YALFPHM V EN+A+GL+++ V ++E   R  EAL MV L
Sbjct: 65  GVEAAGLPPYQRDVNTVFQDYALFPHMNVLENIAYGLKVKGVGKAERHSRAEEALAMVAL 124

Query: 138 AEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQL 197
           A    RKP QLSGGQ+QR+A+ARA+VN+P+VLLLDE L ALD KLR+QMQ ELK+LQRQL
Sbjct: 125 AGYGARKPAQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQGELKKLQRQL 184

Query: 198 GITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQAT 257
           GITFIFVTHDQ EALSMSDR+ V   G+IEQ  +PR +Y  P   FVA F+G  NV +  
Sbjct: 185 GITFIFVTHDQTEALSMSDRVAVFNRGRIEQVDTPRNLYMKPSTTFVAEFVGTSNVVRGE 244

Query: 258 TIDRIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPEDLRI-EEIKESEEKGIVGHV 316
              +I+                       G      +RPE +R+ + +  S E  + G +
Sbjct: 245 LAMQIN-----------------------GSPAPFSIRPELIRLGDPVVTSHEVQVSGVL 281

Query: 317 TDRTYKGMTLESVVELESGMCVMVSEFFNEDDPDVD-HSIGQKVAVTWVESWEVVLNDEQ 375
            D  Y+G      ++L++G  + VS+  +     +    +GQ++   W      VL + +
Sbjct: 282 HDVQYQGSATRYELQLDNGQLLAVSQANDRWQKQMQAWQLGQRLQAHWPREAMTVLQETE 341