Pairwise Alignments

Query, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  285 bits (728), Expect = 2e-81
 Identities = 159/360 (44%), Positives = 233/360 (64%), Gaps = 15/360 (4%)

Query: 18  IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77
           + LS I KSF   +++ + N+ +  GEF++ LGPSGCGKTTVLRMIAGFE    G I+++
Sbjct: 4   LTLSNIKKSFGSVQVVHDFNMAIEKGEFVSFLGPSGCGKTTVLRMIAGFEIPTGGSIVIN 63

Query: 78  DQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRL 137
            +D T +   QR++  VFQ+YALFP+M V+ENVAFGL++   P++EI+ RV E L+++ L
Sbjct: 64  GKDQTTLRPNQRNIGMVFQAYALFPNMNVYENVAFGLKVAGKPKAEIDARVKEMLQLIHL 123

Query: 138 AEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQL 197
             +A R P+Q+SGGQQQR+A+ARA+  KP+VLLLDE LSALD K+R  ++ E++Q+Q++L
Sbjct: 124 EHLADRYPYQMSGGQQQRVALARALAPKPEVLLLDEPLSALDAKIRVSLREEIRQIQQKL 183

Query: 198 GITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQAT 257
           GIT IFVTHDQEEALS+SDRI+VM  G+ +Q GSP +IY  P   FVA F+G +N+  AT
Sbjct: 184 GITTIFVTHDQEEALSISDRIVVMNGGRADQIGSPFDIYNKPATRFVASFVGTLNLIDAT 243

Query: 258 TIDRIDEKRIRVDIEGIESIVYYED-EVKAGDKLQVLLRPEDLRIEEIKESEEKG---IV 313
            +D      IRV   G + I   +  +   G+K+ + LRPE   +     S+ KG   I 
Sbjct: 244 VVDS-SSNTIRV---GEQQITLPKPVDAANGEKITLALRPEAGSL----GSDAKGDVAIS 295

Query: 314 GHVTDRTYKGMTLESVVELESGMCVMVSEFFNEDDPDVDHSIGQKVAVTWVESWEVVLND 373
           G VT   + G  + +   L+ G   +  + FN D      ++G++V + +     +++ D
Sbjct: 296 GLVTSSQFLGSVIRT--RLDLGGSTLSFDMFN-DPGTAPPAVGERVTLKFAAGDLMLIKD 352