Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., putrescine ABC transporter permease PotH from Magnetospirillum magneticum AMB-1

 Score =  218 bits (556), Expect = 1e-61
 Identities = 119/271 (43%), Positives = 174/271 (64%), Gaps = 15/271 (5%)

Query: 19  WLVLFVLIPNLMIIGTSFLTRDEANLIKF---------AF--TFENYTRLL-DPLYGKVM 66
           WL+LF L+P L+++  S L+  +  +  +         AF  T   Y  LL D LY    
Sbjct: 40  WLLLFFLVPFLIVLKIS-LSEPQMGIPPYMPLIDWAEGAFKGTLAGYNTLLGDNLYLLAY 98

Query: 67  LHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVLG 126
           L S  +A ++TL CL++GYP AY +A+ P+  R  +L L+ +PFWT+ LIR Y    +L 
Sbjct: 99  LGSLKLAGISTLGCLLLGYPAAYAIARAPQSRRQALLMLVALPFWTSFLIRVYAWIGILK 158

Query: 127 TQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEAAR 186
            +G+LN AL +LGLI  PL+I+ T TAV+IG+VY  LPFMILPLY+ +EK+D + +EAA 
Sbjct: 159 NEGLLNMALQALGLISEPLQILETSTAVVIGMVYSYLPFMILPLYATLEKMDLSLLEAAA 218

Query: 187 DLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQVL 246
           DLG   F+  + V LPL+MPG+I GC+LV +PA+G F I DLLGG   L+IG V+ ++  
Sbjct: 219 DLGCRPFKAFLAVTLPLSMPGVIAGCMLVFIPAVGEFVIPDLLGGPDTLVIGKVLWAEFF 278

Query: 247 NARDWPFGAATSIAL--TLAMAIMLYAYYRA 275
           + RDWP  +A ++A+   L + IM++ ++ A
Sbjct: 279 DNRDWPTASAVAVAMLVLLVVPIMVFQHFEA 309