Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., Putrescine transport system permease protein PotH (TC 3.A.1.11.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  198 bits (503), Expect = 1e-55
 Identities = 105/276 (38%), Positives = 164/276 (59%), Gaps = 13/276 (4%)

Query: 12  IVTLIVGWLVLFVLIPNLMIIGTSFLTRDEA-----NLIKFA-------FTFENYTRLLD 59
           ++ L   WL+L  L+P L++   S      A     +L+++A           N+ +L D
Sbjct: 32  VIALPYIWLILLFLLPFLIVFKISLAEMARAIPPYTDLLEWADGQLSITLNLGNFLQLTD 91

Query: 60  -PLYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRT 118
            PLY +  L S  +A ++T+ CL++GYP A+ VA      R  +L L+I+P WT+ LIR 
Sbjct: 92  DPLYFEAYLQSLQIAGISTICCLLLGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRV 151

Query: 119 YGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLD 178
           Y    +L   G LN  L+ LG+ID PL I+ T  AV IG+VY  LPFM+LP+Y+A+ ++D
Sbjct: 152 YAWMGILKNNGALNNVLLWLGVIDQPLTILHTNLAVYIGIVYAYLPFMVLPIYTALTRID 211

Query: 179 GTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIG 238
            + +EA+ DLGA   +T   +I+PLT  GII G +LV +PA+G F I +LLGG  +++IG
Sbjct: 212 YSLVEASLDLGARPLKTFFSIIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIG 271

Query: 239 NVIKSQVLNARDWPFGAATSIALTLAMAIMLYAYYR 274
            V+  +  N RDWP  +A +I + L + + +  +++
Sbjct: 272 RVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHK 307