Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., spermidine/putrescine ABC transporter membrane protein (NCBI) from Escherichia coli BW25113

 Score =  409 bits (1051), Expect = e-119
 Identities = 194/275 (70%), Positives = 237/275 (86%)

Query: 12  IVTLIVGWLVLFVLIPNLMIIGTSFLTRDEANLIKFAFTFENYTRLLDPLYGKVMLHSFY 71
           ++  IVGWLVLFV +PNLMIIGTSFLTRD+A+ +K  FT +NYTRLLDPLY +V+LHS  
Sbjct: 1   MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLLDPLYFEVLLHSLN 60

Query: 72  MAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQGIL 131
           MA++ATL CLV+GYPFA+ +AK+P K RP +LFL+IVPFWTNSLIR YGLKI L T+G L
Sbjct: 61  MALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYL 120

Query: 132 NQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEAARDLGAN 191
           N+ L+ LG+ID P+RIMFT +AV+IGLVYILLPFM++PLYS+IEKLD   +EAARDLGA+
Sbjct: 121 NEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGAS 180

Query: 192 KFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQVLNARDW 251
           K QT +R+I+PLTMPGII GCLLV+LPA+G+FY++DL+GGAKNLLIGNVIK Q LN RDW
Sbjct: 181 KLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDW 240

Query: 252 PFGAATSIALTLAMAIMLYAYYRAGKLLNKKVELD 286
           PFGAATSI LT+ M +ML  Y+RA +LLNKKVEL+
Sbjct: 241 PFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE 275