Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., ABC-type spermidine/putrescine transport system, permease component I from Enterobacter asburiae PDN3

 Score =  204 bits (519), Expect = 2e-57
 Identities = 109/276 (39%), Positives = 164/276 (59%), Gaps = 13/276 (4%)

Query: 12  IVTLIVGWLVLFVLIPNLMIIGTSFLTRDEA-----NLIKFA-------FTFENYTRLLD 59
           ++ +   WL+L  L+P L++   S      A     NL+ +A           N+ +L D
Sbjct: 32  VIAMPYVWLILLFLLPFLIVFKISLAEMARAIPPYTNLLDWADGQLTLTLNLGNFLQLTD 91

Query: 60  -PLYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRT 118
            PLY +  L S  +A ++TL CLV+GYP A+ VA      R  +L L+I+P WT+ LIR 
Sbjct: 92  DPLYFEAYLQSLQVAAISTLCCLVMGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRV 151

Query: 119 YGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLD 178
           Y    +L   G+LN  LM LG+ID PL I+ T  AV IG+VY  LPFM+LP+Y+A+ ++D
Sbjct: 152 YAWMGILKNNGVLNNFLMWLGVIDQPLTILHTNLAVYIGIVYAYLPFMVLPIYTALTRID 211

Query: 179 GTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIG 238
            + +EA+ DLGA   +T   VI+PLT  GII G +LV +PA+G F I +LLGG  +++IG
Sbjct: 212 YSLVEASLDLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIG 271

Query: 239 NVIKSQVLNARDWPFGAATSIALTLAMAIMLYAYYR 274
            V+  +  N RDWP  +A +I + L + + +  +++
Sbjct: 272 RVLWQEFFNNRDWPVASAVAIVMLLLLIVPIMWFHK 307