Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., spermidine/putrescine ABC transporter permease PotB from Escherichia coli ECRC102

 Score =  407 bits (1047), Expect = e-118
 Identities = 195/286 (68%), Positives = 238/286 (83%), Gaps = 1/286 (0%)

Query: 2   MSKKLNLQNAIVTLIVGWLVLFVLIPNLMIIGTSFLTRDEANLIKFAFTFENYTRLLDPL 61
           M      QN ++  IVGWLVLFV +PNLMIIGTSFL RD+A+ +K  FT +NYTRLLDPL
Sbjct: 1   MKNTSKFQNVVIVTIVGWLVLFVFLPNLMIIGTSFLARDDASFVKMVFTLDNYTRLLDPL 60

Query: 62  YGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGL 121
           Y +V+LHS  MA++ATL CLV+GYPFA+ +AK+P K RP +LFL+IVPFWTNSLIR YGL
Sbjct: 61  YFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGL 120

Query: 122 KIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTY 181
           KI L T+G LN+ L+ LG+ID P+RIMFT +AV+IGLVYILLPFM++PLYS+IEKLD   
Sbjct: 121 KIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPL 180

Query: 182 IEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVI 241
           +EAARDLGA+K QT +R+I+PLTMPGII GCLLV+LPA+G+FY++DL+GGAKNLLIGNVI
Sbjct: 181 LEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVI 240

Query: 242 KSQVLNARDWPFGAATSIALTLAMAIMLYAYYRAGKLLNKK-VELD 286
           K Q LN RDWPFGAATSI LT+ M +ML  Y+RA +LLNKK  E+D
Sbjct: 241 KVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASRLLNKKATEID 286