Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., putrescine ABC transporter permease PotH from Dickeya dadantii 3937

 Score =  197 bits (501), Expect = 2e-55
 Identities = 104/276 (37%), Positives = 160/276 (57%), Gaps = 13/276 (4%)

Query: 12  IVTLIVGWLVLFVLIPNLMIIGTSF------------LTRDEANLIKFAFTFENYTRLL- 58
           ++ L   WL+   ++P L++   SF            L     N ++ +    NY +LL 
Sbjct: 34  VIALPYLWLLCLFMLPFLIVFKISFAEMARTVPPYTDLLEWAENRLQISLNIGNYLQLLS 93

Query: 59  DPLYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRT 118
           DPLY    L S  +A ++TL CL +GYP A+ VA      R  +L L+I+P WT+ LIR 
Sbjct: 94  DPLYIDAYLQSLKVAAISTLCCLAVGYPMAWAVAHSKSSTRNILLLLVILPSWTSFLIRV 153

Query: 119 YGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLD 178
           Y    +L   GILN  L+ LG+ID PL I+ T  AV IG+VY  LPFM+LP+Y+A+ +LD
Sbjct: 154 YAWMGILKDNGILNNFLLWLGVIDQPLVILHTNLAVYIGVVYSYLPFMVLPIYTALTRLD 213

Query: 179 GTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIG 238
            + +EA+ DLGA   +T   VI+PLT  GII G +LV +P +G + I +LLGG  +++IG
Sbjct: 214 YSLVEASLDLGARPVRTFFSVIVPLTKGGIIAGSMLVFIPTVGEYVIPELLGGPDSIMIG 273

Query: 239 NVIKSQVLNARDWPFGAATSIALTLAMAIMLYAYYR 274
            ++  +  N RDWP  +A ++ +   + + +  +++
Sbjct: 274 RILWQEFFNNRDWPVASAVAMVMLFLLIVPIIWFHK 309