Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., polyamine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  150 bits (378), Expect = 3e-41
 Identities = 77/240 (32%), Positives = 136/240 (56%), Gaps = 1/240 (0%)

Query: 12  LVYLFLYLPIIVLIANSFNENKFGI-KWGGFTTKWYHALMNNDSLMQAAWHSINVAVFSA 70
           L+ LFL LP++V+I  SFN   F +    GF+  WY     +   M+A  +S+ VA  + 
Sbjct: 23  LILLFLILPVLVIIPLSFNSGSFLVYPLQGFSLHWYQDFFASAEWMRALKNSVIVAPAAT 82

Query: 71  TAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFTL 130
             A + G+L A+ L R  F GK +V  ++   M+ P +++ ++    F  +G    FF+L
Sbjct: 83  VLAMVFGTLAAIGLTRGNFPGKALVMALVISPMVVPVVIIGVASYLFFAPLGLGNSFFSL 142

Query: 131 LIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWLL 190
           ++ H    +PFV++TV   L GF+  ++ AA  LGA      +++ LPL  P V +G L 
Sbjct: 143 IVVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASPLTAFRRVTLPLIAPGVISGALF 202

Query: 191 SFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVASQLL 250
           +F+ S D+V+++ F+ GP    LP +++S ++  +SP + A AT+++  S++L++  + L
Sbjct: 203 AFSTSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAFSVLLLLTLEWL 262